RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 SLAMF6Q96DU3 332 aa12.1□□□□□ -0.47
USF1-209ENST00000529476 COQ7Q99807 217 aa12.1□□□□□ -0.47
USF1-209ENST00000529476 ATF6BQ99941 703 aa12.1□□□□□ -0.47
USF1-209ENST00000529476 YIPF3Q9GZM5 350 aa12.1□□□□□ -0.47
USF1-209ENST00000529476 OR51B6Q9H340 312 aa12.1□□□□□ -0.47
USF1-209ENST00000529476 CENPMQ9NSP4 180 aa12.1□□□□□ -0.47
USF1-209ENST00000529476 CISD1Q9NZ45 108 aaKnown RBP12.1□□□□□ -0.47
USF1-209ENST00000529476 FBN3Q75N90 2809 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 HS3ST1O14792 307 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 SBK2P0C263 348 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 FAM157BP0CG42 384 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 NR4A1P22736 598 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 WNT5AP41221 380 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 MTNR1AP48039 350 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 NKX6-1P78426 367 aaPredicted RBP12.09□□□□□ -0.47
USF1-209ENST00000529476 GALK2Q01415 458 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 SNTB2Q13425 540 aaKnown RBP12.09□□□□□ -0.47
USF1-209ENST00000529476 TMED1Q13445 227 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 SMN1Q16637 294 aaKnown RBP12.09□□□□□ -0.47
USF1-209ENST00000529476 RSPO1Q2MKA7 263 aaPredicted RBP12.09□□□□□ -0.47
USF1-209ENST00000529476 VHLLQ6RSH7 139 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 USP51Q70EK9 711 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 SLC35F2Q8IXU6 374 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 C8orf59Q8N0T1 100 aaPredicted RBP12.09□□□□□ -0.47
USF1-209ENST00000529476 RFLNBQ8N5W9 214 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 ZNF454Q8N9F8 522 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 THEM6Q8WUY1 208 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 NRGNQ92686 78 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 RNFT2Q96EX2 444 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 Q96MT0 163 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 LIME1Q9H400 295 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 AMBNQ9NP70 447 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 DDX28Q9NUL7 540 aaKnown RBP12.09□□□□□ -0.47
USF1-209ENST00000529476 ATPIF1Q9UII2 106 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.09□□□□□ -0.47
USF1-209ENST00000529476 COPS3Q9UNS2 423 aa12.09□□□□□ -0.47
USF1-209ENST00000529476 GPRIN2O60269 458 aa12.08□□□□□ -0.48
USF1-209ENST00000529476 LYNP07948 512 aa12.08□□□□□ -0.48
USF1-209ENST00000529476 ALOX5APP20292 161 aa12.08□□□□□ -0.48
USF1-209ENST00000529476 THBS4P35443 961 aa12.08□□□□□ -0.48
USF1-209ENST00000529476 ATP6V1E1P36543 226 aa12.08□□□□□ -0.48
USF1-209ENST00000529476 ZNF91Q05481 1191 aa12.08□□□□□ -0.48
USF1-209ENST00000529476 POU4F2Q12837 409 aa12.08□□□□□ -0.48
USF1-209ENST00000529476 ECH1Q13011 328 aa12.08□□□□□ -0.48
USF1-209ENST00000529476 KRTAP27-1Q3LI81 207 aa12.08□□□□□ -0.48
USF1-209ENST00000529476 ZNF101Q8IZC7 436 aa12.08□□□□□ -0.48
USF1-209ENST00000529476 NUP37Q8NFH4 326 aa12.08□□□□□ -0.48
USF1-209ENST00000529476 RNF133Q8WVZ7 376 aa12.08□□□□□ -0.48
USF1-209ENST00000529476 FBXW5Q969U6 566 aa12.08□□□□□ -0.48
USF1-209ENST00000529476 C4orf45Q96LM5 186 aa12.08□□□□□ -0.48
USF1-209ENST00000529476 COPS4Q9BT78 406 aa12.08□□□□□ -0.48
USF1-209ENST00000529476 TTTY10Q9BZA0 68 aa12.08□□□□□ -0.48
USF1-209ENST00000529476 CA10Q9NS85 328 aa12.08□□□□□ -0.48
USF1-209ENST00000529476 EIF3KQ9UBQ5 218 aaKnown RBP12.08□□□□□ -0.48
USF1-209ENST00000529476 LAMP5Q9UJQ1 280 aa12.08□□□□□ -0.48
USF1-209ENST00000529476 GRIP1Q9Y3R0 1128 aa12.08□□□□□ -0.48
USF1-209ENST00000529476 SPEF1Q9Y4P9 236 aa12.08□□□□□ -0.48
USF1-209ENST00000529476 HSPE1-MOB4S4R3N1 261 aa12.08□□□□□ -0.48
USF1-209ENST00000529476 SNTNA6NMZ2 147 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 PRR32B1ATL7 298 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 ZNF878C9JN71 531 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 F5H5K5 113 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 SMPD2O60906 423 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 ABHD16AO95870 558 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 NGFP01138 241 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 ACSM4P0C7M7 580 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 DBTP11182 482 aaKnown RBP12.07□□□□□ -0.48
USF1-209ENST00000529476 PCSK6P29122 969 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 OPRL1P41146 370 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 HSPA13P48723 471 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 FABP6P51161 128 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 UCP2P55851 309 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 ERVS71-1P61550 626 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 AKAP6Q13023 2319 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 CDK5R2Q13319 367 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 TAF13Q15543 124 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 SNCBQ16143 134 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 MSMPQ1L6U9 139 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 LAIR2Q6ISS4 152 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 RFPL4BQ6ZWI9 263 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 NAA40Q86UY6 237 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 ZNF611Q8N823 705 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 FBLIM1Q8WUP2 373 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 TMEM171Q8WVE6 324 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 TBX5Q99593 518 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 DHRS9Q9BPW9 319 aa12.07□□□□□ -0.48
USF1-209ENST00000529476 DSCAMO60469 2012 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 TACC2O95359 2948 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 SPG11Q96JI7 2443 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 A0A1W2PQL4 384 aaPredicted RBP12.06□□□□□ -0.48
USF1-209ENST00000529476 ZNF670-ZNF695F2Z2N8 137 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 PSMD9O00233 223 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 ICMTO60725 284 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 LCKP06239 509 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 H2BFMP0C1H6 154 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 GLRXP35754 106 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 RAD52P43351 418 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 PRKXP51817 358 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 CXCR4P61073 352 aa12.06□□□□□ -0.48
USF1-209ENST00000529476 ADIPOQQ15848 244 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms