RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 PAPOLGQ9BWT3 736 aaKnown RBP3.82□□□□□ -1.8
CSDE1-212ENST00000529046 C1orf21Q9H246 121 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 RNF122Q9H9V4 155 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 SDHAF3Q9NRP4 125 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 GLRX2Q9NS18 164 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 DCAF16Q9NXF7 216 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 ZNF225Q9UK10 706 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 MRTO4Q9UKD2 239 aaKnown RBP3.82□□□□□ -1.8
CSDE1-212ENST00000529046 ABCG2Q9UNQ0 655 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 EIF3LQ9Y262 564 aaKnown RBP3.82□□□□□ -1.8
CSDE1-212ENST00000529046 PLEKHA6Q9Y2H5 1048 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 NSG2Q9Y328 171 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 PLLPQ9Y342 182 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 SLC6A5Q9Y345 797 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 ZNF175Q9Y473 711 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 WIF1Q9Y5W5 379 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 ZNF780BQ9Y6R6 833 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 HRNRQ86YZ3 2850 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-212ENST00000529046 VPS13CQ709C8 3753 aa3.82□□□□□ -1.8
CSDE1-212ENST00000529046 IGHV4-30-2A0A087WSY4 118 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 SRRM4A7MD48 611 aaKnown RBP3.81□□□□□ -1.8
CSDE1-212ENST00000529046 EEF1E1-BLOC1S5C9J1V9 151 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 SLC33A1O00400 549 aaPredicted RBP3.81□□□□□ -1.8
CSDE1-212ENST00000529046 MANBAO00462 879 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 EEF1E1O43324 174 aaKnown RBP3.81□□□□□ -1.8
CSDE1-212ENST00000529046 IDH3BO43837 385 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 FADS1O60427 444 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 TBX19O60806 448 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 NME6O75414 186 aaPredicted RBP3.81□□□□□ -1.8
CSDE1-212ENST00000529046 REM1O75628 298 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 GSTA1P08263 222 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 SNRPAP09012 282 aaKnown RBP3.81□□□□□ -1.8
CSDE1-212ENST00000529046 TAC1P20366 129 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 DPP4P27487 766 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 CASQ1P31415 396 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 UGT2B10P36537 528 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 FEN1P39748 380 aaKnown RBP3.81□□□□□ -1.8
CSDE1-212ENST00000529046 CD79BP40259 229 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 MAP3K8P41279 467 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 PKNOX1P55347 436 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 GPR50Q13585 617 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 LASP1Q14847 261 aaKnown RBP3.81□□□□□ -1.8
CSDE1-212ENST00000529046 TRADDQ15628 312 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 ACKR1Q16570 336 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 TMEM44Q2T9K0 475 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 ARMCX4Q5H9R4 360 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 ZNF678Q5SXM1 525 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 ZCCHC12Q6PEW1 402 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 GDPGP1Q6ZNW5 385 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 RNF165Q6ZSG1 346 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 CHMP1BQ7LBR1 199 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 SSX8Q7RTT4 187 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 YRDCQ86U90 279 aaKnown RBP3.81□□□□□ -1.8
CSDE1-212ENST00000529046 MMGT1Q8N4V1 131 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 WFDC11Q8NEX6 87 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 ACMSDQ8TDX5 336 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 SELENOMQ8WWX9 145 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 STARD4Q96DR4 205 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 CCDC126Q96EE4 140 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 L3HYPDHQ96EM0 354 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 SPXQ9BT56 116 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 CABLES2Q9BTV7 478 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 TRIM15Q9C019 465 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 IQCGQ9H095 443 aaKnown RBP3.81□□□□□ -1.8
CSDE1-212ENST00000529046 PTGES2Q9H7Z7 377 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 RAB9BQ9NP90 201 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 FANCFQ9NPI8 374 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 FARSBQ9NSD9 589 aaKnown RBP3.81□□□□□ -1.8
CSDE1-212ENST00000529046 GIN1Q9NXP7 522 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 NINJ2Q9NZG7 142 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 KLRF1Q9NZS2 232 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 BCAP29Q9UHQ4 241 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 AP4B1Q9Y6B7 739 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 EML6Q6ZMW3 1958 aa3.81□□□□□ -1.8
CSDE1-212ENST00000529046 A0A087WZY1 265 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 A0A087X0K7 114 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 A0A1B0GVY2 172 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 A0A1W2PQD3 144 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 A0A1W2PRV1 198 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 SLC22A20A6NK97 555 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 A8MT66 165 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 DEFB108AA8MXU0 73 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 B4DXG7 233 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 ZNF732B4DXR9 585 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 UPK1AO00322 258 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 SMPD2O60906 423 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 CRLF1O75462 422 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 SUPT7LO94864 414 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 OR4F21O95013 312 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 LRATO95237 230 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 TGM6O95932 706 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 IL3P08700 152 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 ABHD2P08910 425 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 ZNF17P17021 662 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 PSMB1P20618 241 aaKnown RBP3.8□□□□□ -1.8
CSDE1-212ENST00000529046 LOXP28300 417 aaPredicted RBP3.8□□□□□ -1.8
CSDE1-212ENST00000529046 IL12BP29460 328 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 GPR183P32249 361 aa3.8□□□□□ -1.8
CSDE1-212ENST00000529046 SNU13P55769 128 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms