RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 DENRO43583 198 aaKnown RBP4.52□□□□□ -1.69
PCF11-202ENST00000528336 PSTPIP1O43586 416 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 SLC19A2O60779 497 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 CNMDO75829 334 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 GOLGA8HP0CJ92 632 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 BCKDHAP12694 445 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 NPR2P20594 1047 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 IDSP22304 550 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 MAS1LP35410 378 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 VHLP40337 213 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 SLC1A1P43005 524 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 MAGEA6P43360 314 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 BRCC3P46736 316 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 MLF1P58340 268 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 AP3S2P59780 193 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 IL9RQ01113 521 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 RIPPLY1Q0D2K3 151 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 FASTKQ14296 549 aaKnown RBP4.52□□□□□ -1.69
PCF11-202ENST00000528336 OR4D1Q15615 310 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 TSC22D1Q15714 1073 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 IMPG1Q17R60 797 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 C15orf32Q32M92 178 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 DCAF12Q5T6F0 453 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 LRRC31Q6UY01 552 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 TMUB2Q71RG4 321 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 HSD11B1LQ7Z5J1 315 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 TMEM25Q86YD3 366 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 ZNF786Q8N393 782 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 TRAM1L1Q8N609 369 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 TMEM156Q8N614 296 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.52□□□□□ -1.69
PCF11-202ENST00000528336 C15orf54Q8N8G6 183 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 ZNRF1Q8ND25 227 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 C19orf18Q8NEA5 215 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 OR5D18Q8NGL1 313 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 OR6N2Q8NGY6 317 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 MRPL24Q96A35 216 aaKnown RBP4.52□□□□□ -1.69
PCF11-202ENST00000528336 ISOC2Q96AB3 205 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 SNF8Q96H20 258 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 RANBP9Q96S59 729 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 TMEM121Q9BTD3 319 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 RSG1Q9BU20 258 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 TRIM45Q9H8W5 580 aaPredicted RBP4.52□□□□□ -1.69
PCF11-202ENST00000528336 USE1Q9NZ43 259 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 SLC17A4Q9Y2C5 497 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 TBL2Q9Y4P3 447 aaKnown RBP4.52□□□□□ -1.69
PCF11-202ENST00000528336 CPQQ9Y646 472 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 NID2Q14112 1375 aa4.52□□□□□ -1.69
PCF11-202ENST00000528336 GOLGA6L10A6NI86 522 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 ZNF724A8MTY0 619 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 M0QXV9 152 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 PRMT5O14744 637 aaPredicted RBP4.51□□□□□ -1.69
PCF11-202ENST00000528336 AIM2O14862 343 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 CASKO14936 926 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 AQP9O43315 295 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 SRSF10O75494 262 aaKnown RBP4.51□□□□□ -1.69
PCF11-202ENST00000528336 ATP5LO75964 103 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 ANXA9O76027 345 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 GJB5O95377 273 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 C1orf105O95561 183 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 LDOC1O95751 146 aaPredicted RBP4.51□□□□□ -1.69
PCF11-202ENST00000528336 SLC25A27O95847 323 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 CD160O95971 181 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 IGSF6O95976 241 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 IGHG1P01857 330 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 IL6P05231 212 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 MELTFP08582 738 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 HBQ1P09105 142 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 CTRB1P17538 263 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 HLA-DMAP28067 261 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 GCAP28676 217 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 IFNA8P32881 189 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 SPRP35270 261 aaPredicted RBP4.51□□□□□ -1.69
PCF11-202ENST00000528336 GPR1P46091 355 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 SERPINB9P50453 376 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 PLK1P53350 603 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 REEP5Q00765 189 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 MARCH8Q5T0T0 291 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 CTRB2Q6GPI1 263 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 PNCKQ6P2M8 343 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 CYS1Q717R9 158 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 OR2W3Q7Z3T1 314 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 ZNF677Q86XU0 584 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 GVQW1Q8N7I0 195 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 CATSPER1Q8NEC5 780 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 TEX47Q8TBZ9 253 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 RNF133Q8WVZ7 376 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 TFGQ92734 400 aaPredicted RBP4.51□□□□□ -1.69
PCF11-202ENST00000528336 PSMG2Q969U7 264 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 RPEQ96AT9 228 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 B3GALT6Q96L58 329 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 TAAR1Q96RJ0 339 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 CYP2S1Q96SQ9 504 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 NICN1Q9BSH3 213 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 APOOQ9BUR5 198 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 ZNF426Q9BUY5 554 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 CD274Q9NZQ7 290 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 FBXO7Q9Y3I1 522 aa4.51□□□□□ -1.69
PCF11-202ENST00000528336 MYH4Q9Y623 1939 aa4.5□□□□□ -1.69
PCF11-202ENST00000528336 MN1Q10571 1320 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms