RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 RAB39BQ96DA2 213 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 SAMD8Q96LT4 415 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 NMNAT3Q96T66 252 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 GPA33Q99795 319 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 REEP1Q9H902 201 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 IL20Q9NYY1 176 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 ASH2LQ9UBL3 628 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 ANK2Q01484 3957 aa8.18□□□□□ -1.1
CHD7-208ENST00000528280 IGLV1-36A0A0B4J1U3 117 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 TRAV20A0A0B4J274 112 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 CDC14BO60729 498 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 RP2O75695 350 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 MPZL1O95297 269 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 GASTP01350 101 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 IGHV1-46P01743 117 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 HLA-DQA2P01906 255 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 RAP2AP10114 183 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 HIST1H1CP16403 213 aaKnown RBP8.17□□□□□ -1.1
CHD7-208ENST00000528280 SELEP16581 610 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 CPT2P23786 658 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 SRP14P37108 136 aaKnown RBP8.17□□□□□ -1.1
CHD7-208ENST00000528280 MPV17P39210 176 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 ELF3P78545 371 aaPredicted RBP8.17□□□□□ -1.1
CHD7-208ENST00000528280 PSG7Q13046 419 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 TRIP10Q15642 601 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 MICAQ29983 383 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 CR1LQ2VPA4 569 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 CCDC92Q53HC0 331 aaPredicted RBP8.17□□□□□ -1.1
CHD7-208ENST00000528280 SPATA46Q5T0L3 261 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 LIPNQ5VXI9 398 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 OR2T5Q6IEZ7 315 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 PGBD2Q6P3X8 592 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 ZNF620Q6ZNG0 422 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 USP51Q70EK9 711 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 OR52E2Q8NGJ4 325 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 OR2T29Q8NH02 315 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 OR4K13Q8NH42 304 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 OR51F2Q8NH61 342 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 CLDND2Q8NHS1 167 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 CCL17Q92583 94 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 CMBLQ96DG6 245 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 ASB9Q96DX5 294 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 HCAR1Q9BXC0 346 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 IL19Q9UHD0 177 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 PURGQ9UJV8 347 aaKnown RBP8.17□□□□□ -1.1
CHD7-208ENST00000528280 STARD10Q9Y365 291 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 LYVE1Q9Y5Y7 322 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 CDH10Q9Y6N8 788 aa8.17□□□□□ -1.1
CHD7-208ENST00000528280 TCRBV5S2A0A599 114 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 AQP12BA6NM10 295 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 GNGT2O14610 69 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 RER1O15258 196 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 NCR1O76036 304 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 IFNGP01579 166 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 MSMBP08118 114 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 T-ENOLP0DO92 83 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 GAAP10253 952 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 GATA3P23771 443 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 IGFBP5P24593 272 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 TPTEP56180 551 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 LMO4P61968 165 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 TNFAIP6P98066 277 aaPredicted RBP8.16□□□□□ -1.1
CHD7-208ENST00000528280 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.16□□□□□ -1.1
CHD7-208ENST00000528280 ANK3Q12955 4377 aaKnown RBP8.16□□□□□ -1.1
CHD7-208ENST00000528280 MALLQ13021 153 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 DNAL1Q4LDG9 190 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 CD300LDQ6UXZ3 194 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 FBXW12Q6X9E4 464 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 RINLQ6ZS11 566 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 RFPL4BQ6ZWI9 263 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 AQP12AQ8IXF9 295 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 LNX2Q8N448 690 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 SLC26A10Q8NG04 563 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 OR4C15Q8NGM1 316 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 OR13G1Q8NGZ3 307 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 SPTSSAQ969W0 71 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 TMEM186Q96B77 213 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 ZNF582Q96NG8 517 aaPredicted RBP8.16□□□□□ -1.1
CHD7-208ENST00000528280 TSSK2Q96PF2 358 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 PITX2Q99697 317 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 DGCR6LQ9BY27 220 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 RPRD1BQ9NQG5 326 aaKnown RBP8.16□□□□□ -1.1
CHD7-208ENST00000528280 TAS2R1Q9NYW7 299 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 TREM2Q9NZC2 230 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 CYB5R1Q9UHQ9 305 aa8.16□□□□□ -1.1
CHD7-208ENST00000528280 NOP16Q9Y3C1 178 aaKnown RBP8.16□□□□□ -1.1
CHD7-208ENST00000528280 SAMHD1Q9Y3Z3 626 aaKnown RBP8.16□□□□□ -1.1
CHD7-208ENST00000528280 OR6C68A6NDL8 312 aa8.15□□□□□ -1.1
CHD7-208ENST00000528280 GYG2O15488 501 aa8.15□□□□□ -1.1
CHD7-208ENST00000528280 CST1P01037 141 aa8.15□□□□□ -1.1
CHD7-208ENST00000528280 ATP6V1B2P21281 511 aa8.15□□□□□ -1.1
CHD7-208ENST00000528280 FMO3P31513 532 aa8.15□□□□□ -1.1
CHD7-208ENST00000528280 IL2RGP31785 369 aa8.15□□□□□ -1.1
CHD7-208ENST00000528280 SRP9P49458 86 aaKnown RBP8.15□□□□□ -1.1
CHD7-208ENST00000528280 MS4A2Q01362 244 aa8.15□□□□□ -1.1
CHD7-208ENST00000528280 MVKQ03426 396 aa8.15□□□□□ -1.1
CHD7-208ENST00000528280 CCNIQ14094 377 aa8.15□□□□□ -1.1
CHD7-208ENST00000528280 SLC35F1Q5T1Q4 408 aa8.15□□□□□ -1.1
CHD7-208ENST00000528280 ZNF770Q6IQ21 691 aaPredicted RBP8.15□□□□□ -1.1
CHD7-208ENST00000528280 SLC18B1Q6NT16 456 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms