RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 NAA11Q9BSU3 229 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-214ENST00000528165 APOOQ9BUR5 198 aa13.16□□□□□ -0.3
CAPN1-214ENST00000528165 RPS10P5Q9NQ39 176 aa13.16□□□□□ -0.3
CAPN1-214ENST00000528165 GDE1Q9NZC3 331 aa13.16□□□□□ -0.3
CAPN1-214ENST00000528165 METTL1Q9UBP6 276 aaKnown RBP13.16□□□□□ -0.3
CAPN1-214ENST00000528165 B9D1Q9UPM9 204 aa13.16□□□□□ -0.3
CAPN1-214ENST00000528165 FOXS1O43638 330 aa13.16□□□□□ -0.3
CAPN1-214ENST00000528165 LRP3O75074 770 aa13.16□□□□□ -0.3
CAPN1-214ENST00000528165 MT-ND4LP03901 98 aa13.16□□□□□ -0.3
CAPN1-214ENST00000528165 LPAR6P43657 344 aa13.16□□□□□ -0.3
CAPN1-214ENST00000528165 EIF5AP63241 154 aaKnown RBP13.16□□□□□ -0.3
CAPN1-214ENST00000528165 EGR4Q05215 589 aa13.16□□□□□ -0.3
CAPN1-214ENST00000528165 KCTD18Q6PI47 426 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-214ENST00000528165 BCORP1Q8N888 145 aa13.16□□□□□ -0.3
CAPN1-214ENST00000528165 MARCH1Q8TCQ1 289 aa13.16□□□□□ -0.3
CAPN1-214ENST00000528165 ROBO4Q8WZ75 1007 aa13.16□□□□□ -0.3
CAPN1-214ENST00000528165 KTI12Q96EK9 354 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-214ENST00000528165 DZANK1Q9NVP4 752 aa13.16□□□□□ -0.3
CAPN1-214ENST00000528165 RAB27BO00194 218 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 TXNL1O43396 289 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 CD5P06127 495 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 PVRP15151 417 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 RAB6AP20340 208 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 RAB38P57729 211 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 RPS21P63220 83 aaKnown RBP13.15□□□□□ -0.3
CAPN1-214ENST00000528165 PRSS54Q6PEW0 395 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 DHRS11Q6UWP2 260 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 FAM46BQ96A09 425 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 ZNF285Q96NJ3 590 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 STARD5Q9NSY2 213 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 ASH2LQ9UBL3 628 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 RAB22AQ9UL26 194 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 PRSS38A1L453 326 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 GATCO43716 136 aaKnown RBP13.15□□□□□ -0.3
CAPN1-214ENST00000528165 SERPINA5P05154 406 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 HPGDP15428 266 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 RCC1P18754 421 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-214ENST00000528165 AGAP20933 346 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 NME2P22392 152 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 RD3Q7Z3Z2 195 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 CATSPERDQ86XM0 798 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 ZNF761Q86XN6 746 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-214ENST00000528165 CSNK1A1LQ8N752 337 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 OR4D6Q8NGJ1 314 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 ZNF563Q8TA94 476 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 KIRREL1Q96J84 757 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 AKR1E2Q96JD6 320 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 AQP10Q96PS8 301 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 FN3KRPQ9HA64 309 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 OR5AC2Q9NZP5 309 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 THAP10Q9P2Z0 257 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-214ENST00000528165 HHLA2Q9UM44 414 aa13.15□□□□□ -0.3
CAPN1-214ENST00000528165 A0A1W2PPE3 182 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 A0A1W2PQU0 124 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 FBXO24O75426 580 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 PMP2P02689 132 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 CD37P11049 281 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 ST6GAL1P15907 406 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 C1orf100Q5SVJ3 147 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 TMEM244Q5VVB8 128 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 PSRC1Q6PGN9 363 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-214ENST00000528165 RSC1A1Q92681 617 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 TAF9BQ9HBM6 251 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 CACFD1Q9UGQ2 172 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 KPTNQ9Y664 436 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 LAMA2P24043 3122 aaKnown RBP13.14□□□□□ -0.31
CAPN1-214ENST00000528165 MYO7AQ13402 2215 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 WIPF3A6NGB9 483 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 C11orf98E9PRG8 122 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 KAT7O95251 611 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 HTR3BO95264 441 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 FCGR3AP08637 254 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 CT45A8P0DMV1 189 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 CT45A9P0DMV2 189 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 DVL1P1P54792 670 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-214ENST00000528165 ROM1Q03395 351 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 SQSTM1Q13501 440 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 TMEM128Q5BJH2 165 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 CT45A2Q5DJT8 189 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 MRPL43Q8N983 215 aaKnown RBP13.14□□□□□ -0.31
CAPN1-214ENST00000528165 BHLHE23Q8NDY6 225 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 TCTEX1D2Q8WW35 142 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 SLC39A7Q92504 469 aa13.14□□□□□ -0.31
CAPN1-214ENST00000528165 NECAB3Q96P71 396 aaPredicted RBP13.14□□□□□ -0.31
CAPN1-214ENST00000528165 TRBV23-1A0A0A0MS06 115 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 C9JQL5 133 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 ADAP1O75689 374 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 IGHV2-70P01814 119 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 SRSF5Q13243 272 aaKnown RBP13.13□□□□□ -0.31
CAPN1-214ENST00000528165 BIKQ13323 160 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 MDGA2Q7Z553 956 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 NKAIN3Q8N8D7 197 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 DNAJA3Q96EY1 480 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 RAB18Q9NP72 206 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 LRP12Q9Y561 859 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 FANCMQ8IYD8 2048 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 OIP5O43482 229 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 SLC16A7O60669 478 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 APBB3O95704 486 aa13.13□□□□□ -0.31
CAPN1-214ENST00000528165 TBPP20226 339 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms