RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 OR51A7Q8NH64 312 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 RHOXF1Q8NHV9 184 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 RNF138Q8WVD3 245 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 ADAMTS14Q8WXS8 1223 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 AKAP1Q92667 903 aaKnown RBP eCLIP3.71□□□□□ -1.82
CD44-226ENST00000527889 GGHQ92820 318 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 OSTF1Q92882 214 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 TAAR8Q969N4 342 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 SGTBQ96EQ0 304 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 C14orf79Q96F83 325 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 PGAM5Q96HS1 289 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 THOC3Q96J01 351 aaKnown RBP3.71□□□□□ -1.82
CD44-226ENST00000527889 C20orf173Q96LM9 149 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 TNFRSF13CQ96RJ3 184 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 SSX3Q99909 188 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 NAA11Q9BSU3 229 aaPredicted RBP3.71□□□□□ -1.82
CD44-226ENST00000527889 ZNF426Q9BUY5 554 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 IFT27Q9BW83 186 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 TAPBPLQ9BX59 468 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 YTHDF1Q9BYJ9 559 aaKnown RBP3.71□□□□□ -1.82
CD44-226ENST00000527889 PKIBQ9C010 78 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 OR11A1Q9GZK7 315 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 C6orf62Q9GZU0 229 aaPredicted RBP3.71□□□□□ -1.82
CD44-226ENST00000527889 OR52D1Q9H346 318 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 UBQLN3Q9H347 655 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 MED20Q9H944 212 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 SLC25A19Q9HC21 320 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 NEK6Q9HC98 313 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 MCCC2Q9HCC0 563 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 HHATLQ9HCP6 504 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 KRCC1Q9NPI7 259 aaPredicted RBP3.71□□□□□ -1.82
CD44-226ENST00000527889 CLN6Q9NWW5 311 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 SCN3BQ9NY72 215 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 ERVK-18Q9QC07 812 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 CRNNQ9UBG3 495 aaPredicted RBP3.71□□□□□ -1.82
CD44-226ENST00000527889 UPB1Q9UBR1 384 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 DKK2Q9UBU2 259 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 FBXL2Q9UKC9 423 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 TMED7Q9Y3B3 224 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 WIF1Q9Y5W5 379 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 CHCHD2Q9Y6H1 151 aaPredicted RBP3.71□□□□□ -1.82
CD44-226ENST00000527889 CDH10Q9Y6N8 788 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 HSPE1-MOB4S4R3N1 261 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 NBEAL1Q6ZS30 2694 aa3.71□□□□□ -1.82
CD44-226ENST00000527889 CACNA1DQ01668 2161 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 PKDREJQ9NTG1 2253 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 LRRK2Q5S007 2527 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 IGLV3-32A0A0A0MS00 114 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 KRTAP23-1A1A580 65 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 SMIM30A4D0T7 59 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 HTR3EA5X5Y0 456 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 BTBD17A6NE02 478 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 ARGFXA6NJG6 315 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 A6NL46 340 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 FAM183AA6NL82 134 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 MCIDASD6RGH6 385 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 C11orf98E9PRG8 122 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 BLOC1S5-TXNDC5H3BN57 136 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 BHLHE40O14503 412 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 CTDSP2O14595 271 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 SURF4O15260 269 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 RRP8O43159 456 aaKnown RBP3.7□□□□□ -1.82
CD44-226ENST00000527889 LRRTM2O43300 516 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 GATCO43716 136 aaKnown RBP3.7□□□□□ -1.82
CD44-226ENST00000527889 HCN1O60741 890 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 SCGB2A1O75556 95 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 SLC25A12O75746 678 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 SERPINI2O75830 405 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 RBBP9O75884 186 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 RCBTB2O95199 551 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 FADS2O95864 444 aaKnown RBP3.7□□□□□ -1.82
CD44-226ENST00000527889 TGFAP01135 160 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 BGLAPP02818 100 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 TFAP2AP05549 437 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 STSP08842 583 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 ADRA2AP08913 450 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 LIPCP11150 499 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 ICAM2P13598 275 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 AHCYP23526 432 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 ZFP36P26651 326 aaKnown RBP3.7□□□□□ -1.82
CD44-226ENST00000527889 CD82P27701 267 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 PCSK6P29122 969 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 RPL4P36578 427 aaKnown RBP3.7□□□□□ -1.82
CD44-226ENST00000527889 AQP2P41181 271 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 MAP2K4P45985 399 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 RPL5P46777 297 aaKnown RBP3.7□□□□□ -1.82
CD44-226ENST00000527889 RPS5P46782 204 aaKnown RBP3.7□□□□□ -1.82
CD44-226ENST00000527889 ALDH3B2P48448 385 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 DNASE1L1P49184 302 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 POLR2HP52434 150 aaKnown RBP3.7□□□□□ -1.82
CD44-226ENST00000527889 GABARAPL2P60520 117 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 CXCR4P61073 352 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 SNRPGP62308 76 aaKnown RBP3.7□□□□□ -1.82
CD44-226ENST00000527889 ERVK-25P63136 954 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 SLC35A2P78381 396 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 OC90Q02509 493 aaPredicted RBP3.7□□□□□ -1.82
CD44-226ENST00000527889 PMS2P3Q13401 168 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 GAMTQ14353 236 aa3.7□□□□□ -1.82
CD44-226ENST00000527889 ZNF74Q16587 644 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms