RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 STARD10Q9Y365 291 aa22.47■■□□□ 1.19
TSPAN4-217ENST00000527644 DBHP09172 617 aa22.46■■□□□ 1.19
TSPAN4-217ENST00000527644 GGT2P36268 569 aa22.46■■□□□ 1.19
TSPAN4-217ENST00000527644 GPR6P46095 362 aaPredicted RBP22.46■■□□□ 1.19
TSPAN4-217ENST00000527644 PSG7Q13046 419 aa22.46■■□□□ 1.19
TSPAN4-217ENST00000527644 FAM209AQ5JX71 171 aa22.46■■□□□ 1.19
TSPAN4-217ENST00000527644 TMEM179BQ7Z7N9 219 aa22.46■■□□□ 1.19
TSPAN4-217ENST00000527644 PAPD5Q8NDF8 572 aaKnown RBP22.46■■□□□ 1.19
TSPAN4-217ENST00000527644 HPS1Q92902 700 aa22.46■■□□□ 1.19
TSPAN4-217ENST00000527644 ZNF275Q9NSD4 429 aaPredicted RBP22.46■■□□□ 1.19
TSPAN4-217ENST00000527644 MRPL22Q9NWU5 206 aaKnown RBP22.46■■□□□ 1.19
TSPAN4-217ENST00000527644 PDP1Q9P0J1 537 aaPredicted RBP22.46■■□□□ 1.19
TSPAN4-217ENST00000527644 LRP5LA4QPB2 252 aa22.45■■□□□ 1.18
TSPAN4-217ENST00000527644 TPD52L2O43399 206 aaKnown RBP22.45■■□□□ 1.18
TSPAN4-217ENST00000527644 SPRY3O43610 288 aa22.45■■□□□ 1.18
TSPAN4-217ENST00000527644 FKBP6O75344 327 aa22.45■■□□□ 1.18
TSPAN4-217ENST00000527644 RP2O75695 350 aa22.45■■□□□ 1.18
TSPAN4-217ENST00000527644 IGHV1-46P01743 117 aa22.45■■□□□ 1.18
TSPAN4-217ENST00000527644 ZNF823P16415 610 aa22.45■■□□□ 1.18
TSPAN4-217ENST00000527644 ZNF16P17020 682 aaPredicted RBP22.45■■□□□ 1.18
TSPAN4-217ENST00000527644 PYCR1P32322 319 aa22.45■■□□□ 1.18
TSPAN4-217ENST00000527644 CRYBB2P43320 205 aa22.45■■□□□ 1.18
TSPAN4-217ENST00000527644 CBX1P83916 185 aa22.45■■□□□ 1.18
TSPAN4-217ENST00000527644 TSTQ16762 297 aaKnown RBP22.45■■□□□ 1.18
TSPAN4-217ENST00000527644 ZMAT1Q5H9K5 638 aa22.45■■□□□ 1.18
TSPAN4-217ENST00000527644 LINC00346Q8IVM7 164 aa22.45■■□□□ 1.18
TSPAN4-217ENST00000527644 TEX47Q8TBZ9 253 aa22.45■■□□□ 1.18
TSPAN4-217ENST00000527644 PTP4A1Q93096 173 aa22.45■■□□□ 1.18
TSPAN4-217ENST00000527644 MSI2Q96DH6 328 aaKnown RBP22.45■■□□□ 1.18
TSPAN4-217ENST00000527644 RBM4Q9BWF3 364 aaKnown RBP22.45■■□□□ 1.18
TSPAN4-217ENST00000527644 POFUT1Q9H488 388 aa22.45■■□□□ 1.18
TSPAN4-217ENST00000527644 TMEM160Q9NX00 188 aa22.45■■□□□ 1.18
TSPAN4-217ENST00000527644 TIMM8AO60220 97 aaPredicted RBP22.44■■□□□ 1.18
TSPAN4-217ENST00000527644 E2F6O75461 281 aa22.44■■□□□ 1.18
TSPAN4-217ENST00000527644 IFNGP01579 166 aa22.44■■□□□ 1.18
TSPAN4-217ENST00000527644 ADH4P08319 380 aa22.44■■□□□ 1.18
TSPAN4-217ENST00000527644 ECH1Q13011 328 aa22.44■■□□□ 1.18
TSPAN4-217ENST00000527644 CRMP1Q14194 572 aa22.44■■□□□ 1.18
TSPAN4-217ENST00000527644 TRIP10Q15642 601 aa22.44■■□□□ 1.18
TSPAN4-217ENST00000527644 CFAP77Q6ZQR2 320 aa22.44■■□□□ 1.18
TSPAN4-217ENST00000527644 HIPK1Q86Z02 1210 aa22.44■■□□□ 1.18
TSPAN4-217ENST00000527644 OR5L1Q8NGL2 311 aa22.44■■□□□ 1.18
TSPAN4-217ENST00000527644 CMBLQ96DG6 245 aa22.44■■□□□ 1.18
TSPAN4-217ENST00000527644 DIRC2Q96SL1 478 aa22.44■■□□□ 1.18
TSPAN4-217ENST00000527644 PITX2Q99697 317 aa22.44■■□□□ 1.18
TSPAN4-217ENST00000527644 SAP30LQ9HAJ7 183 aa22.44■■□□□ 1.18
TSPAN4-217ENST00000527644 DNAJB9Q9UBS3 223 aa22.44■■□□□ 1.18
TSPAN4-217ENST00000527644 ZDHHC8Q9ULC8 765 aa22.44■■□□□ 1.18
TSPAN4-217ENST00000527644 IGHV1-69-2A0A0G2JMI3 117 aa22.43■■□□□ 1.18
TSPAN4-217ENST00000527644 LOC100289279A0A1B0GTE1 492 aa22.43■■□□□ 1.18
TSPAN4-217ENST00000527644 ZSCAN5BA6NJL1 495 aa22.43■■□□□ 1.18
TSPAN4-217ENST00000527644 H3BN98 237 aa22.43■■□□□ 1.18
TSPAN4-217ENST00000527644 KITLGP21583 273 aa22.43■■□□□ 1.18
TSPAN4-217ENST00000527644 SLC25A1P53007 311 aa22.43■■□□□ 1.18
TSPAN4-217ENST00000527644 ZNRF4Q8WWF5 429 aa22.43■■□□□ 1.18
TSPAN4-217ENST00000527644 APOBEC3DQ96AK3 386 aaPredicted RBP22.43■■□□□ 1.18
TSPAN4-217ENST00000527644 HAVCR1Q96D42 359 aa22.43■■□□□ 1.18
TSPAN4-217ENST00000527644 NMNAT2Q9BZQ4 307 aa22.43■■□□□ 1.18
TSPAN4-217ENST00000527644 CMC2Q9NRP2 79 aa22.43■■□□□ 1.18
TSPAN4-217ENST00000527644 PURGQ9UJV8 347 aaKnown RBP22.43■■□□□ 1.18
TSPAN4-217ENST00000527644 ABCA2Q9BZC7 2435 aa22.42■■□□□ 1.18
TSPAN4-217ENST00000527644 RIIAD1A6NNX1 92 aa22.42■■□□□ 1.18
TSPAN4-217ENST00000527644 PPIHO43447 177 aaKnown RBP22.42■■□□□ 1.18
TSPAN4-217ENST00000527644 CDC14BO60729 498 aa22.42■■□□□ 1.18
TSPAN4-217ENST00000527644 RSPO1Q2MKA7 263 aaPredicted RBP22.42■■□□□ 1.18
TSPAN4-217ENST00000527644 KRTAP27-1Q3LI81 207 aa22.42■■□□□ 1.18
TSPAN4-217ENST00000527644 FAM166AQ6J272 317 aa22.42■■□□□ 1.18
TSPAN4-217ENST00000527644 USP51Q70EK9 711 aa22.42■■□□□ 1.18
TSPAN4-217ENST00000527644 OR51L1Q8NGJ5 315 aa22.42■■□□□ 1.18
TSPAN4-217ENST00000527644 OR9Q1Q8NGQ5 310 aa22.42■■□□□ 1.18
TSPAN4-217ENST00000527644 SLCO4A1Q96BD0 722 aa22.42■■□□□ 1.18
TSPAN4-217ENST00000527644 ELMOD3Q96FG2 381 aa22.42■■□□□ 1.18
TSPAN4-217ENST00000527644 ATF6BQ99941 703 aa22.42■■□□□ 1.18
TSPAN4-217ENST00000527644 EGLN1Q9GZT9 426 aa22.42■■□□□ 1.18
TSPAN4-217ENST00000527644 MMADHCQ9H3L0 296 aaPredicted RBP22.42■■□□□ 1.18
TSPAN4-217ENST00000527644 ZNF556Q9HAH1 456 aa22.42■■□□□ 1.18
TSPAN4-217ENST00000527644 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.41■■□□□ 1.183e-9■■■□□ 18.5
TSPAN4-217ENST00000527644 TVP23AA6NH52 213 aa22.41■■□□□ 1.18
TSPAN4-217ENST00000527644 LMX1BO60663 402 aa22.41■■□□□ 1.18
TSPAN4-217ENST00000527644 RAC2P15153 192 aa22.41■■□□□ 1.18
TSPAN4-217ENST00000527644 ZNF3P17036 446 aa22.41■■□□□ 1.18
TSPAN4-217ENST00000527644 FMO3P31513 532 aa22.41■■□□□ 1.18
TSPAN4-217ENST00000527644 GRK5P34947 590 aa22.41■■□□□ 1.18
TSPAN4-217ENST00000527644 MSL2Q9HCI7 577 aa22.41■■□□□ 1.18
TSPAN4-217ENST00000527644 PNRC2Q9NPJ4 139 aaKnown RBP22.41■■□□□ 1.18
TSPAN4-217ENST00000527644 KCNS2Q9ULS6 477 aa22.41■■□□□ 1.18
TSPAN4-217ENST00000527644 MALRD1Q5VYJ5 2156 aa22.4■■□□□ 1.18
TSPAN4-217ENST00000527644 TGFAP01135 160 aa22.4■■□□□ 1.18
TSPAN4-217ENST00000527644 CD55P08174 381 aa22.4■■□□□ 1.18
TSPAN4-217ENST00000527644 ANXA8P13928 327 aa22.4■■□□□ 1.18
TSPAN4-217ENST00000527644 SPI1P17947 270 aa22.4■■□□□ 1.18
TSPAN4-217ENST00000527644 IL2RGP31785 369 aa22.4■■□□□ 1.18
TSPAN4-217ENST00000527644 ERFP50548 548 aa22.4■■□□□ 1.18
TSPAN4-217ENST00000527644 BLVRAP53004 296 aa22.4■■□□□ 1.18
TSPAN4-217ENST00000527644 CDK5R2Q13319 367 aa22.4■■□□□ 1.18
TSPAN4-217ENST00000527644 HFEQ30201 348 aa22.4■■□□□ 1.18
TSPAN4-217ENST00000527644 CHRFAM7AQ494W8 412 aa22.4■■□□□ 1.18
TSPAN4-217ENST00000527644 FBXW12Q6X9E4 464 aa22.4■■□□□ 1.18
TSPAN4-217ENST00000527644 COLCA1Q6ZS62 124 aa22.4■■□□□ 1.18
TSPAN4-217ENST00000527644 C1orf159Q96HA4 380 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms