RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 C5orf49A4QMS7 147 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 XPNPEP2O43895 674 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 SMPD2O60906 423 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 ABHD16AO95870 558 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 CRYAAP02489 173 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 PCSK6P29122 969 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 THBS4P35443 961 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 HTR5AP47898 357 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 MTNR1AP48039 350 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 UCP2P55851 309 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 IL5RAQ01344 420 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 ROM1Q03395 351 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 PLP2Q04941 152 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 ADIPOQQ15848 244 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 SLC22A25Q6T423 547 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 SPATC1Q76KD6 591 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 THAP5Q7Z6K1 395 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 SLC35F2Q8IXU6 374 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 ALDH16A1Q8IZ83 802 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 ZNF454Q8N9F8 522 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 OR52I1Q8NGK6 324 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 OR2AJ1Q8NGZ0 328 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 THEM6Q8WUY1 208 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 SGCDQ92629 289 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 PPP1R14AQ96A00 147 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 RNFT2Q96EX2 444 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 RADILQ96JH8 1075 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 OR8B4Q96RC9 309 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 CNN2Q99439 309 aaKnown RBP9.27□□□□□ -0.93
NEDD8-205ENST00000527046 KCNJ15Q99712 375 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 HDHD2Q9H0R4 259 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 PLCXD1Q9NUJ7 323 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 FKBP14Q9NWM8 211 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 CLN6Q9NWW5 311 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 CISD1Q9NZ45 108 aaKnown RBP9.27□□□□□ -0.93
NEDD8-205ENST00000527046 MRM2Q9UI43 246 aaKnown RBP9.27□□□□□ -0.93
NEDD8-205ENST00000527046 STARD10Q9Y365 291 aa9.27□□□□□ -0.93
NEDD8-205ENST00000527046 DSCAMO60469 2012 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 A0A1W2PQL4 384 aaPredicted RBP9.26□□□□□ -0.93
NEDD8-205ENST00000527046 PSMD9O00233 223 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 HS3ST1O14792 307 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 DENRO43583 198 aaKnown RBP9.26□□□□□ -0.93
NEDD8-205ENST00000527046 PNPP00491 289 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 PTHP01270 115 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 IGHA1P01876 353 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 LYNP07948 512 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 SOD3P08294 240 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 OR2T7P0C7T2 308 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 FAM157BP0CG42 384 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 GLRXP35754 106 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 GDI2P50395 445 aaKnown RBP9.26□□□□□ -0.93
NEDD8-205ENST00000527046 SNCBQ16143 134 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 SWI5Q1ZZU3 235 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 TBC1D28Q2M2D7 210 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 ALKBH6Q3KRA9 238 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 C6orf141Q5SZD1 244 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 LCN1P1Q5VSP4 162 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 C11orf71Q6IPW1 123 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 KRT80Q6KB66 452 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 LRRN1Q6UXK5 716 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 RFPL4BQ6ZWI9 263 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 LRP11Q86VZ4 500 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 C8orf59Q8N0T1 100 aaPredicted RBP9.26□□□□□ -0.93
NEDD8-205ENST00000527046 ZNF611Q8N823 705 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 OR2T27Q8NH04 317 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 RFKQ969G6 155 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 MARS2Q96GW9 593 aaKnown RBP9.26□□□□□ -0.93
NEDD8-205ENST00000527046 C4orf45Q96LM5 186 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 SIGLEC11Q96RL6 698 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 ATF6BQ99941 703 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 DHRS9Q9BPW9 319 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 C1QTNF5Q9BXJ0 243 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 TTTY10Q9BZA0 68 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 FGF20Q9NP95 211 aaPredicted RBP9.26□□□□□ -0.93
NEDD8-205ENST00000527046 CA10Q9NS85 328 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 CENPMQ9NSP4 180 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 TBCCD1Q9NVR7 557 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 PAK1IP1Q9NWT1 392 aaPredicted RBP9.26□□□□□ -0.93
NEDD8-205ENST00000527046 MYEF2Q9P2K5 600 aaKnown RBP9.26□□□□□ -0.93
NEDD8-205ENST00000527046 RAB26Q9ULW5 256 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.26□□□□□ -0.93
NEDD8-205ENST00000527046 POLR1DQ9Y2S0 133 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 ARFGEF3Q5TH69 2177 aa9.26□□□□□ -0.93
NEDD8-205ENST00000527046 PDZD2O15018 2839 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 OVOL3O00110 214 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 TMCC2O75069 709 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 LIMS3P0CW19 117 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 LIMS4P0CW20 117 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 CCNOP22674 350 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 TTKP33981 857 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 APLNRP35414 380 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 CXCR4P61073 352 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 GALK2Q01415 458 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 ECH1Q13011 328 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 SNAI3Q3KNW1 292 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 DTX2Q86UW9 622 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 ZNF485Q8NCK3 441 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 SETD9Q8NE22 299 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 OR1J2Q8NGS2 313 aa9.25□□□□□ -0.93
NEDD8-205ENST00000527046 Q96MT0 163 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms