RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 AP4B1Q9Y6B7 739 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 CEPT1Q9Y6K0 416 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 U3KQV3 271 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 PIEZO1Q92508 2521 aa3.93□□□□□ -1.78
USP48-211ENST00000526044 A0A087WUU8 490 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 TMEM72A0PK05 275 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 SH3PXD2BA1X283 911 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 OR2M5A3KFT3 312 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 IFITM10A6NMD0 228 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 GJE1A6NN92 205 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 A8MVM7 634 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 MAGEB3O15480 346 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 OR2T1O43869 369 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 MGRN1O60291 552 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 OR10H3O60404 316 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 HCN1O60741 890 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 CCNB2O95067 398 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 LYPD3O95274 346 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 PAHP00439 452 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 IGHG3P01860 377 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 OPN1LWP04000 364 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 HIST1H2ABP04908 130 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 IFI30P13284 250 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 CPN1P15169 458 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 ZNF17P17021 662 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 ZNF24P17028 368 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 GABRB1P18505 474 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 FUT1P19526 365 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 TAGLN2P37802 199 aaKnown RBP3.92□□□□□ -1.78
USP48-211ENST00000526044 SLC15A1P46059 708 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 STARP49675 285 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 CARD18P57730 90 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 B3GALT5-AS1P59052 145 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 PRKCDQ05655 676 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 SLC34A1Q06495 639 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 FOXF1Q12946 379 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 PPP1R8Q12972 351 aaKnown RBP3.92□□□□□ -1.78
USP48-211ENST00000526044 SELENBP1Q13228 472 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 DGCR6Q14129 220 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 GK3PQ14409 553 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 RCN1Q15293 331 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 SGCBQ16585 318 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 CTF1Q16619 201 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 MICAQ29983 383 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 EXOC3L2Q2M3D2 409 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 TMEM176BQ3YBM2 270 aaPredicted RBP3.92□□□□□ -1.78
USP48-211ENST00000526044 CMPK2Q5EBM0 449 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 FGD3Q5JSP0 725 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 PAPPA-AS1Q5QFB9 102 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 PDSS1Q5T2R2 415 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 GGNBP1Q5YKI7 109 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 C5orf46Q6UWT4 87 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 UNQ6126/PRO20091Q6UXV3 157 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 MBOAT2Q6ZWT7 520 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 HIST3H2AQ7L7L0 130 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 CHMP1BQ7LBR1 199 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 ADCK1Q86TW2 530 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 HIPK1Q86Z02 1210 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 OFCC1Q8IZS5 231 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 SVOPLQ8N434 492 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 TMEM116Q8NCL8 245 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 ICA1LQ8NDH6 482 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 OR56B2PQ8NGI1 322 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 NEIL3Q8TAT5 605 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 SLC7A13Q8TCU3 470 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 GNPDA2Q8TDQ7 276 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 GIPC3Q8TF64 312 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 TMEM239Q8WW34 195 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 ACOT11Q8WXI4 607 aaPredicted RBP3.92□□□□□ -1.78
USP48-211ENST00000526044 SMPDL3BQ92485 455 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 HIST1H2ACQ93077 130 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 ABTB1Q969K4 478 aaPredicted RBP3.92□□□□□ -1.78
USP48-211ENST00000526044 SLC25A36Q96CQ1 311 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 DDIT4LQ96D03 193 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 SNRNP40Q96DI7 357 aaKnown RBP3.92□□□□□ -1.78
USP48-211ENST00000526044 SAT2Q96F10 170 aaPredicted RBP3.92□□□□□ -1.78
USP48-211ENST00000526044 NRBF2Q96F24 287 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 INTS14Q96SY0 518 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 TMEM43Q9BTV4 400 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 TAPBPLQ9BX59 468 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 CACNG6Q9BXT2 260 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 POTEKPQ9BYX7 375 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 KCNN2Q9H2S1 579 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 ZDHHC11Q9H8X9 412 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 TIGARQ9NQ88 270 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 HINT3Q9NQE9 182 aaKnown RBP3.92□□□□□ -1.78
USP48-211ENST00000526044 PDP1Q9P0J1 537 aaPredicted RBP3.92□□□□□ -1.78
USP48-211ENST00000526044 STX18Q9P2W9 335 aaKnown RBP3.92□□□□□ -1.78
USP48-211ENST00000526044 CHRNA9Q9UGM1 479 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 TRAPPC4Q9Y296 219 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 SLC6A5Q9Y345 797 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 CAB39Q9Y376 341 aaPredicted RBP3.92□□□□□ -1.78
USP48-211ENST00000526044 FREM2Q5SZK8 3169 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 SPTBN2O15020 2390 aa3.92□□□□□ -1.78
USP48-211ENST00000526044 TRAV36DV7A0A075B6V5 113 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 A0A0J9YW62 118 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 TRBV4-1A0A0J9YWV2 114 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 A0A1B0GTH9 108 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 ENO4A6NNW6 628 aa3.91□□□□□ -1.78
USP48-211ENST00000526044 EFCAB9A8MZ26 197 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms