RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 IGHV3-15A0A0B4J1V0 119 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 TEX13CA0A0J9YWL9 993 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 TRBV4-1A0A0J9YWV2 114 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 CFAP73A6NFT4 308 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 COL6A5A8TX70 2615 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 USP17L23D6RBM5 183 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 FTCDNL1E5RQL4 147 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 NPIPA2E9PIF3 369 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 NPIPA3F8WFD2 350 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 TNFSF11O14788 317 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 SMAD9O15198 467 aaKnown RBP2.55□□□□□ -2
CSDE1-208ENST00000524652 HCN1O60741 890 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 ENTPD5O75356 428 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 SERPINB7O75635 380 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 TRAPPC6AO75865 159 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 ATP5HO75947 161 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 NUDT14O95848 222 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 TGM6O95932 706 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 HPGDP15428 266 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 NQO1P15559 274 aaKnown RBP2.55□□□□□ -2
CSDE1-208ENST00000524652 ZNF708P17019 499 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 ZNF17P17021 662 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 ZNF26P17031 533 aaPredicted RBP2.55□□□□□ -2
CSDE1-208ENST00000524652 PGCP20142 388 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 CCNA2P20248 432 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 CBLP22681 906 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 CHMP24386 653 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 RRM2P31350 389 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 SFTPDP35247 375 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 SLC1A3P43003 542 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 SLC6A8P48029 635 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 P2RY4P51582 365 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 MNAT1P51948 309 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 RGS8P57771 180 aaPredicted RBP2.55□□□□□ -2
CSDE1-208ENST00000524652 FXYD6P3P58550 94 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 ACTR3P61158 418 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 RPP38P78345 283 aaKnown RBP2.55□□□□□ -2
CSDE1-208ENST00000524652 TRAP1Q12931 704 aaKnown RBP2.55□□□□□ -2
CSDE1-208ENST00000524652 FLOT2Q14254 428 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 GNA13Q14344 377 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 SLC10A1Q14973 349 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 TOMM20Q15388 145 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 IFI44LQ53G44 452 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 HIST2H2BDQ6DRA6 164 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 TBPL2Q6SJ96 375 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 SLC22A25Q6T423 547 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 C3P1Q6ZMU1 363 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 Q6ZPB1 254 aaPredicted RBP2.55□□□□□ -2
CSDE1-208ENST00000524652 RAI1Q7Z5J4 1906 aaPredicted RBP2.55□□□□□ -2
CSDE1-208ENST00000524652 TRPT1Q86TN4 253 aaKnown RBP2.55□□□□□ -2
CSDE1-208ENST00000524652 SLC22A16Q86VW1 577 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 SPATA24Q86W54 205 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 DHFR2Q86XF0 187 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 DOLPP1Q86YN1 238 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 ZDHHC21Q8IVQ6 265 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 MISPQ8IVT2 679 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 SLC30A8Q8IWU4 369 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 AQP12AQ8IXF9 295 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 UBQLNLQ8IYU4 475 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 OFCC1Q8IZS5 231 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 HS3ST5Q8IZT8 346 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 ARHGAP24Q8N264 748 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 CADM2Q8N3J6 435 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 GTPBP8Q8N3Z3 284 aaPredicted RBP2.55□□□□□ -2
CSDE1-208ENST00000524652 LRRC17Q8N6Y2 441 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 NAXEQ8NCW5 288 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 PAPD5Q8NDF8 572 aaKnown RBP2.55□□□□□ -2
CSDE1-208ENST00000524652 ST6GALNAC3Q8NDV1 305 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 ATP6V1C2Q8NEY4 427 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 OR4C15Q8NGM1 316 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 OR5M9Q8NGP3 310 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 OR14L1PQ8NHC6 308 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 PFN4Q8NHR9 129 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 ZNF563Q8TA94 476 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 FAM57AQ8TBR7 257 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 PYDC1Q8WXC3 89 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 ST8SIA1Q92185 356 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 SMPDL3BQ92485 455 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 SLC38A4Q969I6 547 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 SLC35B4Q969S0 331 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 MCUR1Q96AQ8 359 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 SLC47A1Q96FL8 570 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 DUS3LQ96G46 650 aaKnown RBP2.55□□□□□ -2
CSDE1-208ENST00000524652 SLC41A3Q96GZ6 507 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 GRAMD2BQ96HH9 432 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 PRRC1Q96M27 445 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 ZNF300Q96RE9 604 aaPredicted RBP2.55□□□□□ -2
CSDE1-208ENST00000524652 MCHR1Q99705 422 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 GPA33Q99795 319 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 ZNF559Q9BR84 538 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 DENND2DQ9H6A0 471 aaPredicted RBP2.55□□□□□ -2
CSDE1-208ENST00000524652 NTN4Q9HB63 628 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 IL1RAPQ9NPH3 570 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 ACER3Q9NUN7 267 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 PPP1R14DQ9NXH3 145 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 NDE1Q9NXR1 346 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 QPCTLQ9NXS2 382 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 CLCF1Q9UBD9 225 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 RIMS3Q9UJD0 308 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 ANAPC2Q9UJX6 822 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms