RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 SEC61A1P61619 476 aaKnown RBP7.87□□□□□ -1.15
SDC2-207ENST00000522911 HIST1H3AP68431 136 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 TRAM2Q15035 370 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 SLC9A3R2Q15599 337 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 C11orf91Q3C1V1 193 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 ZNF362Q5T0B9 420 aaPredicted RBP7.87□□□□□ -1.15
SDC2-207ENST00000522911 HIST2H3PS2Q5TEC6 136 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 GPR139Q6DWJ6 353 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 PGM2L1Q6PCE3 622 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 C16orf87Q6PH81 154 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 COLCA1Q6ZS62 124 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 MBOAT2Q6ZWT7 520 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 HIST2H3AQ71DI3 136 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 NRMQ8IXM6 262 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 C1orf87Q8N0U7 546 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 BCL6BQ8N143 479 aaPredicted RBP7.87□□□□□ -1.15
SDC2-207ENST00000522911 PARP8Q8N3A8 854 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 TMEM86BQ8N661 226 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 CLDN22Q8N7P3 220 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 OR8G5Q8NG78 346 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 OR2Z1Q8NG97 314 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 OR52E2Q8NGJ4 325 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 OR5L1Q8NGL2 311 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 OR13G1Q8NGZ3 307 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 Q8TCH9 128 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 ITLN1Q8WWA0 313 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 RAB40AQ8WXH6 277 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 ERGIC1Q969X5 290 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 CMBLQ96DG6 245 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 PLEKHA8Q96JA3 519 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 SLC30A2Q9BRI3 323 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 SSBP3Q9BWW4 388 aaPredicted RBP7.87□□□□□ -1.15
SDC2-207ENST00000522911 NDEL1Q9GZM8 345 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 MS4A7Q9GZW8 240 aaPredicted RBP7.87□□□□□ -1.15
SDC2-207ENST00000522911 TMEM165Q9HC07 324 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 FGFR1OP2Q9NVK5 253 aa7.87□□□□□ -1.15
SDC2-207ENST00000522911 VSX1Q9NZR4 365 aaPredicted RBP7.87□□□□□ -1.15
SDC2-207ENST00000522911 A0A087WUU8 490 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 A0A1W2PPL8 197 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 ELOVL7A1L3X0 281 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 IQCF6A8MYZ5 107 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 EFCAB9A8MZ26 197 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 XKRYO14609 159 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 PHYHO14832 338 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 FFAR1O14842 300 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 SLC22A2O15244 555 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 PIP5K1CO60331 668 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 TXNDC12O95881 172 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 TROVE2P10155 538 aaKnown RBP eCLIP7.86□□□□□ -1.15
SDC2-207ENST00000522911 SDHAP31040 664 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 SRP9P49458 86 aaKnown RBP7.86□□□□□ -1.15
SDC2-207ENST00000522911 TOP3AQ13472 1001 aaPredicted RBP7.86□□□□□ -1.15
SDC2-207ENST00000522911 MAPRE2Q15555 327 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 KRTAP27-1Q3LI81 207 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 ZNF404Q494X3 552 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 ZBED5Q49AG3 693 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 MESTQ5EB52 335 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 BTNL3Q6UXE8 466 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 ADCK1Q86TW2 530 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 GLB1L2Q8IW92 636 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 MICU2Q8IYU8 434 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 OR2T12Q8NG77 320 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 APOBEC3DQ96AK3 386 aaPredicted RBP7.86□□□□□ -1.15
SDC2-207ENST00000522911 NEIL1Q96FI4 390 aaPredicted RBP7.86□□□□□ -1.15
SDC2-207ENST00000522911 MEGF10Q96KG7 1140 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 COQ7Q99807 217 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 HDHD2Q9H0R4 259 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 POFUT1Q9H488 388 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 NMNAT1Q9HAN9 279 aaPredicted RBP7.86□□□□□ -1.15
SDC2-207ENST00000522911 NOX4Q9NPH5 578 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 NRIP3Q9NQ35 241 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 GID8Q9NWU2 228 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 GRHPRQ9UBQ7 328 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 TMEM5Q9Y2B1 443 aa7.86□□□□□ -1.15
SDC2-207ENST00000522911 NOTCH1P46531 2555 aa7.85□□□□□ -1.15
SDC2-207ENST00000522911 TRAV27A0A087WT01 109 aa7.85□□□□□ -1.15
SDC2-207ENST00000522911 A0A0G2JND7 137 aa7.85□□□□□ -1.15
SDC2-207ENST00000522911 A0A1W2PRQ8 180 aa7.85□□□□□ -1.15
SDC2-207ENST00000522911 LRRC30A6NM36 301 aa7.85□□□□□ -1.15
SDC2-207ENST00000522911 CDC42EP2O14613 210 aa7.85□□□□□ -1.15
SDC2-207ENST00000522911 MRASO14807 208 aa7.85□□□□□ -1.15
SDC2-207ENST00000522911 PTP4A3O75365 173 aa7.85□□□□□ -1.15
SDC2-207ENST00000522911 NDUFA7O95182 113 aa7.85□□□□□ -1.15
SDC2-207ENST00000522911 PTBP3O95758 552 aaKnown RBP7.85□□□□□ -1.15
SDC2-207ENST00000522911 IFNW1P05000 195 aa7.85□□□□□ -1.15
SDC2-207ENST00000522911 IGHV4-38-2P0DP08 117 aa7.85□□□□□ -1.15
SDC2-207ENST00000522911 CTLA4P16410 223 aa7.85□□□□□ -1.15
SDC2-207ENST00000522911 SELEP16581 610 aa7.85□□□□□ -1.15
SDC2-207ENST00000522911 ZNF26P17031 533 aaPredicted RBP7.85□□□□□ -1.15
SDC2-207ENST00000522911 CALRP27797 417 aaKnown RBP7.85□□□□□ -1.15
SDC2-207ENST00000522911 PSMB10P40306 273 aa7.85□□□□□ -1.15
SDC2-207ENST00000522911 NPY4RP50391 375 aa7.85□□□□□ -1.15
SDC2-207ENST00000522911 DGCR6Q14129 220 aa7.85□□□□□ -1.15
SDC2-207ENST00000522911 LRRC23Q53EV4 343 aaPredicted RBP7.85□□□□□ -1.15
SDC2-207ENST00000522911 CCDC92Q53HC0 331 aaPredicted RBP7.85□□□□□ -1.15
SDC2-207ENST00000522911 ASRGL1Q7L266 308 aa7.85□□□□□ -1.15
SDC2-207ENST00000522911 NLRC3Q7RTR2 1065 aa7.85□□□□□ -1.15
SDC2-207ENST00000522911 ARPINQ7Z6K5 226 aa7.85□□□□□ -1.15
SDC2-207ENST00000522911 KLBQ86Z14 1044 aa7.85□□□□□ -1.15
SDC2-207ENST00000522911 POU5F2Q8N7G0 328 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms