RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 AGR3Q8TD06 166 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 SLC2A14Q8TDB8 520 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 CHMP6Q96FZ7 201 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 RMND5BQ96G75 393 aaPredicted RBP3.04□□□□□ -1.92
SKP1-208ENST00000521216 OLFM3Q96PB7 478 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 CTRCQ99895 268 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 NUP58Q9BVL2 599 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 COX16Q9P0S2 106 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 ZNF282Q9UDV7 671 aaPredicted RBP3.04□□□□□ -1.92
SKP1-208ENST00000521216 SHPKQ9UHJ6 478 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 ZNF222Q9UK12 451 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 PYCARDQ9ULZ3 195 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 STK38LQ9Y2H1 464 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 LRRC42Q9Y546 428 aa3.04□□□□□ -1.92
SKP1-208ENST00000521216 MRPS18BQ9Y676 258 aaKnown RBP3.04□□□□□ -1.92
SKP1-208ENST00000521216 FYCO1Q9BQS8 1478 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 RTEL1-TNFRSF6BF6WH68 1400 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 UACAQ9BZF9 1416 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 IGKV6-21A0A0C4DH24 114 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 A0A1W2PPE3 182 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 CTAGE15A4D2H0 777 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 ZNF879B4DU55 563 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 H3BQF6 201 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 PFDN6O15212 129 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 PSIP1O75475 530 aaKnown RBP3.03□□□□□ -1.92
SKP1-208ENST00000521216 ATP5HO75947 161 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 GABARAPO95166 117 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 KRT75O95678 551 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 MRPL3P09001 348 aaKnown RBP3.03□□□□□ -1.92
SKP1-208ENST00000521216 PABPC4LP0CB38 370 aaKnown RBP3.03□□□□□ -1.92
SKP1-208ENST00000521216 ANXA8P13928 327 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 HOXB8P17481 243 aaPredicted RBP3.03□□□□□ -1.92
SKP1-208ENST00000521216 KITLGP21583 273 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 RAP1GDS1P52306 607 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 NUTF2P61970 127 aaKnown RBP3.03□□□□□ -1.92
SKP1-208ENST00000521216 RPL23AP62750 156 aaKnown RBP3.03□□□□□ -1.92
SKP1-208ENST00000521216 RELAQ04206 551 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 BST1Q10588 318 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 GINS1Q14691 196 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 PON3Q15166 354 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 HADHQ16836 314 aaKnown RBP3.03□□□□□ -1.92
SKP1-208ENST00000521216 VAX1Q5SQQ9 334 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 ANXA8L1Q5VT79 327 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 METTL21CQ5VZV1 264 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 C4orf22Q6V702 233 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 FAM92BQ6ZTR7 304 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 ABHD13Q7L211 337 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 ASCL5Q7RTU5 278 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 TMEM135Q86UB9 458 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 CTAGE6Q86UF2 777 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 IFT20Q8IY31 132 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 LRRC34Q8IZ02 419 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 CCNYL1Q8N7R7 359 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 OR56B2PQ8NGI1 322 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 ZNF461Q8TAF7 563 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 PHOSPHO2Q8TCD6 241 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 CXorf40AQ8TE69 158 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 RNF139Q8WU17 664 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 RAD51AP1Q96B01 352 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 P2RX4Q99571 388 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 CALN1Q9BXU9 219 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 LHX5Q9H2C1 402 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 KLHL28Q9NXS3 571 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 PSME2Q9UL46 239 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 KIF21AQ7Z4S6 1674 aa3.03□□□□□ -1.92
SKP1-208ENST00000521216 FANCD2Q9BXW9 1451 aa3.03□□□□□ -1.93
SKP1-208ENST00000521216 FHOD3Q2V2M9 1422 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 MN1Q10571 1320 aaPredicted RBP3.02□□□□□ -1.93
SKP1-208ENST00000521216 WDR19Q8NEZ3 1342 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 IGHV5-51A0A0C4DH38 117 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 SMIM31A0A1B0GVY4 71 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 SMCO2A6NFE2 343 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 ARGFXA6NJG6 315 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 TRPC5OSA6NMA1 111 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 SLC9A3R1O14745 358 aaPredicted RBP3.02□□□□□ -1.93
SKP1-208ENST00000521216 CASC3O15234 703 aaKnown RBP3.02□□□□□ -1.93
SKP1-208ENST00000521216 B4GALT5O43286 388 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 MCF2P10911 925 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 HNRNPH3P31942 346 aaKnown RBP3.02□□□□□ -1.93
SKP1-208ENST00000521216 RFX3P48380 749 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 RAB4BP61018 213 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 ATP6V0D1P61421 351 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 RAP1AP62834 184 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 ACTG2P63267 376 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 RAD51Q06609 339 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 TCP10Q12799 353 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 CLINT1Q14677 625 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 LY6G6FQ5SQ64 297 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 PRAMEF5Q5TYX0 476 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 PRAMEF6Q5VXH4 476 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 NANOGP8Q6NSW7 305 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 SLC25A48Q6ZT89 311 aaKnown RBP3.02□□□□□ -1.93
SKP1-208ENST00000521216 TPGS1Q6ZTW0 290 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 MMAAQ8IVH4 418 aaKnown RBP3.02□□□□□ -1.93
SKP1-208ENST00000521216 SLC22A9Q8IVM8 553 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 BBS5Q8N3I7 341 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 STPG2Q8N412 459 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 ZNF561Q8N587 486 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 EID2Q8N6I1 236 aa3.02□□□□□ -1.93
SKP1-208ENST00000521216 NATD1Q8N6N6 113 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms