RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 PCP2Q8IVA1 136 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 MKXQ8IYA7 352 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 FAM71AQ8IYT1 594 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 TMEM104Q8NE00 496 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 DUSP18Q8NEJ0 188 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 OR51E1Q8TCB6 317 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 ISOC2Q96AB3 205 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 CHAC1Q9BUX1 264 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 PATZ1Q9HBE1 687 aaKnown RBP3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 SLC39A1Q9NY26 324 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 NYAP2Q9P242 653 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 TRMT112Q9UI30 125 aaKnown RBP3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 DDX19BQ9UMR2 479 aa3.51□□□□□ -1.85
HMGB1P46-201ENST00000520062 MN1Q10571 1320 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 NME4O00746 187 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 CDC40O60508 579 aaKnown RBP eCLIP3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 TGM6O95932 706 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 OXTP01178 125 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 PMCHP20382 165 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 MDKP21741 143 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 USF1P22415 310 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 GABRR2P28476 465 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 BMI1P35226 326 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 NUP62P37198 522 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 FABP6P51161 128 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 CLDN6P56747 220 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 ARG2P78540 354 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 CDH17Q12864 832 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 TMED1Q13445 227 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 ART3Q13508 389 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 PON2Q15165 354 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 GABRA6Q16445 453 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 MLIPQ5VWP3 458 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 RWDD4Q6NW29 188 aaKnown RBP3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 LINC00336Q6ZUF6 198 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 ARIH2OSQ8N7S6 290 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 GATSQ8NAP1 163 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 ZFP90Q8TF47 636 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 ABHD3Q8WU67 409 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 BTN2A3PQ96KV6 586 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 ZNF681Q96N22 645 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 TMEM175Q9BSA9 504 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 SAV1Q9H4B6 383 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 RPP21Q9H633 154 aaKnown RBP3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 ZNF331Q9NQX6 463 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 RBAKQ9NYW8 714 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 COMMD3-BMI1R4GMX3 469 aa3.5□□□□□ -1.85
HMGB1P46-201ENST00000520062 CENPXA8MT69 81 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 KDELR3O43731 214 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 GABARAPO95166 117 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 TDP2O95551 362 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 EIF4EP06730 217 aaKnown RBP3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 CD3GP09693 182 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 RAB5AP20339 215 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 IL32P24001 234 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 PFN2P35080 140 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 CFHR2P36980 270 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 CSNK1A1P48729 337 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 ETV1P50549 477 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 P2RX1P51575 399 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 YWHAEP62258 255 aaKnown RBP3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 ERCC8Q13216 396 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 KIR2DS1Q14954 304 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 C5orf64Q2M2E5 130 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 AADACL4Q5VUY2 407 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 C12orf54Q6X4T0 127 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 SLC35D2Q76EJ3 337 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 UNC93AQ86WB7 457 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 PRSS58Q8IYP2 241 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 TRAM1L1Q8N609 369 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 Q8N976 141 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 FBXO36Q8NEA4 188 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 OR10AD1Q8NGE0 317 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 DCPSQ96C86 337 aaKnown RBP3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 IFI27L2Q9H2X8 130 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 GAL3ST2Q9H3Q3 398 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 XKR8Q9H6D3 395 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 NOX3Q9HBY0 568 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 SLC40A1Q9NP59 571 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 IFNKQ9P0W0 207 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 BZW2Q9Y6E2 419 aaKnown RBP3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 FHOD3Q2V2M9 1422 aa3.49□□□□□ -1.85
HMGB1P46-201ENST00000520062 IGHV5-51A0A0C4DH38 117 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 GSTTP1A0A1W2PQM5 241 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 OR6C74A6NCV1 312 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 PDZK1P1A8MUH7 402 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 MPDU1O75352 247 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 RDH16O75452 317 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 KLK1P06870 262 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 IVLP07476 585 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 PSG2P11465 335 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 HOXB8P17481 243 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 DRD3P35462 400 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 CSKP41240 450 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 HCAR3P49019 387 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 CCR6P51684 374 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 MNAT1P51948 309 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 ZNF133P52736 654 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 TAS2R39P59534 338 aa3.48□□□□□ -1.85
HMGB1P46-201ENST00000520062 UBE2NP61088 152 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms