RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 LZTS2Q9BRK4 669 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 EDA2RQ9HAV5 297 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 SLC38A10Q9HBR0 1119 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 HYOU1Q9Y4L1 999 aa3.11□□□□□ -1.91
PTPN12-213ENST00000519553 C5orf63A6NC05 138 aa3.1□□□□□ -1.91
PTPN12-213ENST00000519553 OR2AG2A6NM03 316 aa3.1□□□□□ -1.91
PTPN12-213ENST00000519553 H7C417 338 aa3.1□□□□□ -1.91
PTPN12-213ENST00000519553 SCAMP2O15127 329 aaKnown RBP3.1□□□□□ -1.91
PTPN12-213ENST00000519553 CLDN11O75508 207 aa3.1□□□□□ -1.91
PTPN12-213ENST00000519553 REM1O75628 298 aa3.1□□□□□ -1.91
PTPN12-213ENST00000519553 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
PTPN12-213ENST00000519553 ERGP11308 486 aa3.1□□□□□ -1.91
PTPN12-213ENST00000519553 SYNJ2BPP57105 145 aa3.1□□□□□ -1.91
PTPN12-213ENST00000519553 VSX2P58304 361 aaPredicted RBP3.1□□□□□ -1.91
PTPN12-213ENST00000519553 RAB10P61026 200 aa3.1□□□□□ -1.91
PTPN12-213ENST00000519553 ZNF616Q08AN1 781 aa3.1□□□□□ -1.91
PTPN12-213ENST00000519553 SNX20Q7Z614 316 aa3.1□□□□□ -1.91
PTPN12-213ENST00000519553 SLC38A4Q969I6 547 aa3.1□□□□□ -1.91
PTPN12-213ENST00000519553 TMEM230Q96A57 120 aa3.1□□□□□ -1.91
PTPN12-213ENST00000519553 ANKRD60Q9BZ19 345 aa3.1□□□□□ -1.91
PTPN12-213ENST00000519553 MTFP1Q9UDX5 166 aa3.1□□□□□ -1.91
PTPN12-213ENST00000519553 TRBV9A0A0B4J1U6 114 aa3.09□□□□□ -1.91
PTPN12-213ENST00000519553 NCBP2LA6PVI3 153 aaKnown RBP3.09□□□□□ -1.91
PTPN12-213ENST00000519553 EIF3HO15372 352 aaKnown RBP eCLIP3.09□□□□□ -1.91
PTPN12-213ENST00000519553 EIF4E2O60573 245 aaKnown RBP3.09□□□□□ -1.91
PTPN12-213ENST00000519553 CIB2O75838 187 aa3.09□□□□□ -1.91
PTPN12-213ENST00000519553 AQP8O94778 261 aa3.09□□□□□ -1.91
PTPN12-213ENST00000519553 CDRT1O95170 752 aa3.09□□□□□ -1.91
PTPN12-213ENST00000519553 SNX4O95219 450 aa3.09□□□□□ -1.91
PTPN12-213ENST00000519553 ARG1P05089 322 aa3.09□□□□□ -1.91
PTPN12-213ENST00000519553 PABPC4LP0CB38 370 aaKnown RBP3.09□□□□□ -1.91
PTPN12-213ENST00000519553 U2AF2P26368 475 aaKnown RBP eCLIP3.09□□□□□ -1.91
PTPN12-213ENST00000519553 RRM2P31350 389 aa3.09□□□□□ -1.91
PTPN12-213ENST00000519553 CRISP1P54107 249 aa3.09□□□□□ -1.91
PTPN12-213ENST00000519553 CDKN2DP55273 166 aa3.09□□□□□ -1.91
PTPN12-213ENST00000519553 CCNA1P78396 465 aa3.09□□□□□ -1.91
PTPN12-213ENST00000519553 RAET1LQ5VY80 246 aa3.09□□□□□ -1.91
PTPN12-213ENST00000519553 C22orf42Q6IC83 251 aa3.09□□□□□ -1.91
PTPN12-213ENST00000519553 COX18Q8N8Q8 333 aa3.09□□□□□ -1.91
PTPN12-213ENST00000519553 OR4A4PQ8NGN8 299 aa3.09□□□□□ -1.91
PTPN12-213ENST00000519553 PHF10Q8WUB8 498 aaKnown RBP3.09□□□□□ -1.91
PTPN12-213ENST00000519553 CAPSLQ8WWF8 208 aa3.09□□□□□ -1.91
PTPN12-213ENST00000519553 EEF1AKMT3Q96AZ1 226 aa3.09□□□□□ -1.91
PTPN12-213ENST00000519553 FGF23Q9GZV9 251 aaPredicted RBP3.09□□□□□ -1.91
PTPN12-213ENST00000519553 MTCH1Q9NZJ7 389 aa3.09□□□□□ -1.91
PTPN12-213ENST00000519553 CCDC59Q9P031 241 aaKnown RBP3.09□□□□□ -1.91
PTPN12-213ENST00000519553 PITPNC1Q9UKF7 332 aa3.09□□□□□ -1.91
PTPN12-213ENST00000519553 PALLDQ8WX93 1383 aa3.09□□□□□ -1.92
PTPN12-213ENST00000519553 AHDC1Q5TGY3 1603 aaPredicted RBP3.08□□□□□ -1.92
PTPN12-213ENST00000519553 TRBV11-1A0A0K0K1C0 115 aa3.08□□□□□ -1.92
PTPN12-213ENST00000519553 SMCO3A2RU48 225 aa3.08□□□□□ -1.92
PTPN12-213ENST00000519553 C9JVG2 144 aa3.08□□□□□ -1.92
PTPN12-213ENST00000519553 NDUFAB1O14561 156 aa3.08□□□□□ -1.92
PTPN12-213ENST00000519553 IL4P05112 153 aa3.08□□□□□ -1.92
PTPN12-213ENST00000519553 PRRX1P54821 245 aa3.08□□□□□ -1.92
PTPN12-213ENST00000519553 CRADDP78560 199 aa3.08□□□□□ -1.92
PTPN12-213ENST00000519553 CDK5Q00535 292 aa3.08□□□□□ -1.92
PTPN12-213ENST00000519553 MPV17L2Q567V2 206 aa3.08□□□□□ -1.92
PTPN12-213ENST00000519553 ARMC12Q5T9G4 340 aa3.08□□□□□ -1.92
PTPN12-213ENST00000519553 UNQ9165/PRO28630Q6UXU0 137 aa3.08□□□□□ -1.92
PTPN12-213ENST00000519553 NPSR1Q6W5P4 371 aa3.08□□□□□ -1.92
PTPN12-213ENST00000519553 CHST4Q8NCG5 386 aa3.08□□□□□ -1.92
PTPN12-213ENST00000519553 OR52E2Q8NGJ4 325 aa3.08□□□□□ -1.92
PTPN12-213ENST00000519553 SLC25A46Q96AG3 418 aa3.08□□□□□ -1.92
PTPN12-213ENST00000519553 DCPSQ96C86 337 aaKnown RBP3.08□□□□□ -1.92
PTPN12-213ENST00000519553 NAP1L5Q96NT1 182 aaPredicted RBP3.08□□□□□ -1.92
PTPN12-213ENST00000519553 HSD17B10Q99714 261 aaKnown RBP3.08□□□□□ -1.92
PTPN12-213ENST00000519553 SULT4A1Q9BR01 284 aa3.08□□□□□ -1.92
PTPN12-213ENST00000519553 TMEM165Q9HC07 324 aa3.08□□□□□ -1.92
PTPN12-213ENST00000519553 C8orf17Q9NRJ1 99 aa3.08□□□□□ -1.92
PTPN12-213ENST00000519553 IGKV1-8A0A0C4DH67 115 aa3.07□□□□□ -1.92
PTPN12-213ENST00000519553 A0A1B0GW55 424 aa3.07□□□□□ -1.92
PTPN12-213ENST00000519553 UBXN8O00124 270 aa3.07□□□□□ -1.92
PTPN12-213ENST00000519553 NVLO15381 856 aaKnown RBP3.07□□□□□ -1.92
PTPN12-213ENST00000519553 RAD51CO43502 376 aa3.07□□□□□ -1.92
PTPN12-213ENST00000519553 DUX4L2P0CJ85 424 aa3.07□□□□□ -1.92
PTPN12-213ENST00000519553 DUX4L3P0CJ86 424 aa3.07□□□□□ -1.92
PTPN12-213ENST00000519553 DUX4L5P0CJ88 424 aa3.07□□□□□ -1.92
PTPN12-213ENST00000519553 DUX4L6P0CJ89 424 aa3.07□□□□□ -1.92
PTPN12-213ENST00000519553 DUX4L7P0CJ90 424 aa3.07□□□□□ -1.92
PTPN12-213ENST00000519553 RNASE2P10153 161 aaKnown RBP3.07□□□□□ -1.92
PTPN12-213ENST00000519553 LOXP28300 417 aaPredicted RBP3.07□□□□□ -1.92
PTPN12-213ENST00000519553 EIF3EP60228 445 aaKnown RBP3.07□□□□□ -1.92
PTPN12-213ENST00000519553 PIGHQ14442 188 aaPredicted RBP3.07□□□□□ -1.92
PTPN12-213ENST00000519553 PGGHGQ32M88 737 aa3.07□□□□□ -1.92
PTPN12-213ENST00000519553 RNASE13Q5GAN3 156 aaKnown RBP3.07□□□□□ -1.92
PTPN12-213ENST00000519553 TCEAL5Q5H9L2 206 aa3.07□□□□□ -1.92
PTPN12-213ENST00000519553 AP1ARQ63HQ0 302 aa3.07□□□□□ -1.92
PTPN12-213ENST00000519553 LRRC66Q68CR7 880 aa3.07□□□□□ -1.92
PTPN12-213ENST00000519553 CBLN2Q8IUK8 224 aa3.07□□□□□ -1.92
PTPN12-213ENST00000519553 TCEAL3Q969E4 200 aa3.07□□□□□ -1.92
PTPN12-213ENST00000519553 SAMD10Q9BYL1 202 aa3.07□□□□□ -1.92
PTPN12-213ENST00000519553 C1orf198Q9H425 327 aa3.07□□□□□ -1.92
PTPN12-213ENST00000519553 FBXO6Q9NRD1 293 aaPredicted RBP3.07□□□□□ -1.92
PTPN12-213ENST00000519553 DUX4Q9UBX2 424 aa3.07□□□□□ -1.92
PTPN12-213ENST00000519553 FLOT1O75955 427 aa3.06□□□□□ -1.92
PTPN12-213ENST00000519553 FTH1P02794 183 aa3.06□□□□□ -1.92
PTPN12-213ENST00000519553 GFERP55789 205 aa3.06□□□□□ -1.92
PTPN12-213ENST00000519553 TAS2R31P59538 309 aa3.06□□□□□ -1.92
PTPN12-213ENST00000519553 IFT88Q13099 833 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms