RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 NOTOA8MTQ0 251 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 DVL2O14641 736 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 SGCEO43556 437 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 WDR1O75083 606 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 B4GALT1P15291 398 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 CX3CR1P49238 355 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 PSMD7P51665 324 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 CXADRP78310 365 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 ZNF45Q02386 682 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 EIF2S3LQ2VIR3 472 aaKnown RBP13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 SLC36A2Q495M3 483 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 ACSF3Q4G176 576 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 CCDC92Q53HC0 331 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 FAM27D1Q5T7N8 215 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 DDI2Q5TDH0 399 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 NUFIP2Q7Z417 695 aaKnown RBP13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 UBE2J2Q8N2K1 259 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 CCDC54Q8NEL0 328 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 HTRA1Q92743 480 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 FBXO17Q96EF6 278 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 WDFY2Q96P53 400 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 PBOV1Q9GZY1 135 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 PPIL3Q9H2H8 161 aaKnown RBP13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 PLEK2Q9NYT0 353 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 MALT1Q9UDY8 824 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 ATPIF1Q9UII2 106 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 ADAM30Q9UKF2 790 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 CMAHPQ9Y471 501 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 CFAP54Q96N23 3096 aa13.23□□□□□ -0.29
TRAPPC9-205ENST00000518839 SPTBN2O15020 2390 aa13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 CNOT4O95628 575 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 HOXD4P09016 255 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 ZNF12P17014 697 aa13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 MPGP29372 298 aa13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 ETV6P41212 452 aa13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 SOX2P48431 317 aa13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 PPP3R1P63098 170 aa13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 ARF1P84077 181 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 SPANXN2Q5MJ10 180 aa13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 FBXW9Q5XUX1 488 aa13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 NSUN5P2Q63ZY6 315 aa13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 SFXN4Q6P4A7 337 aa13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 PLXDC2Q6UX71 529 aa13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 FAM214BQ7L5A3 538 aa13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 TMEM106AQ96A25 262 aa13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 FAM122AQ96E09 287 aa13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 SH3GL3Q99963 347 aa13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 MRI1Q9BV20 369 aa13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 ZCCHC4Q9H5U6 513 aa13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 FOXJ3Q9UPW0 622 aa13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 SLC5A6Q9Y289 635 aa13.22□□□□□ -0.29
TRAPPC9-205ENST00000518839 DOCK7Q96N67 2140 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 A0A1B0GVI7 797 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 LOC107986453A0A1B0GWG9 222 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 A0A1W2PPK0 400 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 FIGNL2A6NMB9 653 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 VGLL3A8MV65 326 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 PIN1P1O15428 100 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 RGS5O15539 181 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 DOK2O60496 412 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 IGHV3-9P01782 118 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 TTRP02766 147 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 BMP4P12644 408 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 ZNF32P17041 273 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 APEX1P27695 318 aaKnown RBP13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 CD40LGP29965 261 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 OTX1P32242 354 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 PRKXP51817 358 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 TPTEP56180 551 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 ZNF121P58317 390 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 FAPQ12884 760 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 GUSBP1Q15486 140 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 ODF4Q2M2E3 257 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 DRAM2Q6UX65 266 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 LUZP2Q86TE4 346 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 RDH10Q8IZV5 341 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 MFSD4AQ8N468 514 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 OR5M9Q8NGP3 310 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 OR6K3Q8NGY3 331 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 OR1F12Q8NHA8 337 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 ASB5Q8WWX0 329 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 ZFP3Q96NJ6 502 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 SLC24A3Q9HC58 644 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 ABRACLQ9P1F3 81 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 CKLFQ9UBR5 152 aa13.21□□□□□ -0.29
TRAPPC9-205ENST00000518839 GTF3C1Q12789 2109 aa13.21□□□□□ -0.3
TRAPPC9-205ENST00000518839 FREM1Q5H8C1 2179 aa13.2□□□□□ -0.3
TRAPPC9-205ENST00000518839 A0A0G2JK05 382 aa13.2□□□□□ -0.3
TRAPPC9-205ENST00000518839 MBD3L4A6NDZ8 208 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC9-205ENST00000518839 MBD3L3A6NE82 208 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC9-205ENST00000518839 OR6C6A6NF89 314 aa13.2□□□□□ -0.3
TRAPPC9-205ENST00000518839 MBD3L5A6NJ08 208 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC9-205ENST00000518839 TTLL8A6PVC2 850 aa13.2□□□□□ -0.3
TRAPPC9-205ENST00000518839 M0R135 149 aa13.2□□□□□ -0.3
TRAPPC9-205ENST00000518839 CTDSP2O14595 271 aa13.2□□□□□ -0.3
TRAPPC9-205ENST00000518839 SYT7O43581 403 aa13.2□□□□□ -0.3
TRAPPC9-205ENST00000518839 SYNGR3O43761 229 aa13.2□□□□□ -0.3
TRAPPC9-205ENST00000518839 SLC19A2O60779 497 aa13.2□□□□□ -0.3
TRAPPC9-205ENST00000518839 NCR1O76036 304 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms