RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 CCL27Q9Y4X3 112 aa2.58□□□□□ -2
CHD1-211ENST00000514344 HSPG2P98160 4391 aa2.58□□□□□ -2
CHD1-211ENST00000514344 DNAH2Q9P225 4427 aa2.58□□□□□ -2
CHD1-211ENST00000514344 TRAV38-1A0A0B4J264 116 aa2.58□□□□□ -2
CHD1-211ENST00000514344 LOC102725191A0A1B0GVB3 256 aa2.58□□□□□ -2
CHD1-211ENST00000514344 EXOC1LA0A1B0GW35 172 aa2.58□□□□□ -2
CHD1-211ENST00000514344 hCG_1807616A0A1W2PRN6 198 aa2.58□□□□□ -2
CHD1-211ENST00000514344 CDHR4A6H8M9 788 aa2.58□□□□□ -2
CHD1-211ENST00000514344 OOEPA6NGQ2 149 aa2.58□□□□□ -2
CHD1-211ENST00000514344 NKX6-3A6NJ46 265 aa2.58□□□□□ -2
CHD1-211ENST00000514344 H0YAE9 185 aa2.58□□□□□ -2
CHD1-211ENST00000514344 CCL24O00175 119 aa2.58□□□□□ -2
CHD1-211ENST00000514344 SLC28A1O00337 649 aa2.58□□□□□ -2
CHD1-211ENST00000514344 TBX19O60806 448 aa2.58□□□□□ -2
CHD1-211ENST00000514344 IFNA6P05013 189 aa2.58□□□□□ -2
CHD1-211ENST00000514344 IGHV4-30-4P0DP06 118 aa2.58□□□□□ -2
CHD1-211ENST00000514344 ETS2P15036 469 aa2.58□□□□□ -2
CHD1-211ENST00000514344 COX7A1P24310 79 aa2.58□□□□□ -2
CHD1-211ENST00000514344 ZNF84P51523 738 aa2.58□□□□□ -2
CHD1-211ENST00000514344 LGALS4P56470 323 aa2.58□□□□□ -2
CHD1-211ENST00000514344 CLRN1P58418 232 aa2.58□□□□□ -2
CHD1-211ENST00000514344 ERVFRD-1P60508 538 aa2.58□□□□□ -2
CHD1-211ENST00000514344 GMFBP60983 142 aa2.58□□□□□ -2
CHD1-211ENST00000514344 DR1Q01658 176 aa2.58□□□□□ -2
CHD1-211ENST00000514344 GNA13Q14344 377 aa2.58□□□□□ -2
CHD1-211ENST00000514344 C9orf152Q5JTZ5 239 aa2.58□□□□□ -2
CHD1-211ENST00000514344 NCR3LG1Q68D85 454 aa2.58□□□□□ -2
CHD1-211ENST00000514344 ZNF826PQ6ZT77 177 aa2.58□□□□□ -2
CHD1-211ENST00000514344 SLC35D2Q76EJ3 337 aa2.58□□□□□ -2
CHD1-211ENST00000514344 DPPA2Q7Z7J5 298 aa2.58□□□□□ -2
CHD1-211ENST00000514344 ANKRD46Q86W74 232 aa2.58□□□□□ -2
CHD1-211ENST00000514344 TMEM139Q8IV31 216 aa2.58□□□□□ -2
CHD1-211ENST00000514344 SLC30A8Q8IWU4 369 aa2.58□□□□□ -2
CHD1-211ENST00000514344 CLIP4Q8N3C7 705 aa2.58□□□□□ -2
CHD1-211ENST00000514344 OR8G5Q8NG78 346 aa2.58□□□□□ -2
CHD1-211ENST00000514344 OR5M8Q8NGP6 311 aa2.58□□□□□ -2
CHD1-211ENST00000514344 TMEM54Q969K7 222 aa2.58□□□□□ -2
CHD1-211ENST00000514344 MOAP1Q96BY2 351 aa2.58□□□□□ -2
CHD1-211ENST00000514344 HAVCR1Q96D42 359 aa2.58□□□□□ -2
CHD1-211ENST00000514344 SEH1LQ96EE3 360 aa2.58□□□□□ -2
CHD1-211ENST00000514344 RNFT2Q96EX2 444 aa2.58□□□□□ -2
CHD1-211ENST00000514344 SLC25A44Q96H78 314 aaPredicted RBP2.58□□□□□ -2
CHD1-211ENST00000514344 RAX2Q96IS3 184 aa2.58□□□□□ -2
CHD1-211ENST00000514344 SPATA25Q9BR10 227 aa2.58□□□□□ -2
CHD1-211ENST00000514344 C1orf50Q9BV19 199 aa2.58□□□□□ -2
CHD1-211ENST00000514344 CXorf65A6NEN9 183 aa2.57□□□□□ -2
CHD1-211ENST00000514344 H3BSA7 217 aa2.57□□□□□ -2
CHD1-211ENST00000514344 LGALS8O00214 317 aa2.57□□□□□ -2
CHD1-211ENST00000514344 RNF13O43567 381 aa2.57□□□□□ -2
CHD1-211ENST00000514344 SLC22A3O75751 556 aa2.57□□□□□ -2
CHD1-211ENST00000514344 BRI3O95415 125 aa2.57□□□□□ -2
CHD1-211ENST00000514344 FSTL3O95633 263 aa2.57□□□□□ -2
CHD1-211ENST00000514344 LINC00032P0C843 101 aa2.57□□□□□ -2
CHD1-211ENST00000514344 PGA4P0DJD7 388 aa2.57□□□□□ -2
CHD1-211ENST00000514344 PGA3P0DJD8 388 aa2.57□□□□□ -2
CHD1-211ENST00000514344 PAICSP22234 425 aaKnown RBP2.57□□□□□ -2
CHD1-211ENST00000514344 CD24P25063 80 aa2.57□□□□□ -2
CHD1-211ENST00000514344 CNTFRP26992 372 aa2.57□□□□□ -2
CHD1-211ENST00000514344 LAP3P28838 519 aa2.57□□□□□ -2
CHD1-211ENST00000514344 MYCNOSP40205 109 aa2.57□□□□□ -2
CHD1-211ENST00000514344 PKNOX1P55347 436 aa2.57□□□□□ -2
CHD1-211ENST00000514344 RPL23AP62750 156 aaKnown RBP2.57□□□□□ -2
CHD1-211ENST00000514344 FMODQ06828 376 aa2.57□□□□□ -2
CHD1-211ENST00000514344 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.57□□□□□ -2
CHD1-211ENST00000514344 SELPLGQ14242 412 aa2.57□□□□□ -2
CHD1-211ENST00000514344 PGS1Q32NB8 556 aa2.57□□□□□ -2
CHD1-211ENST00000514344 FAM27D1Q5T7N8 215 aa2.57□□□□□ -2
CHD1-211ENST00000514344 OTPQ5XKR4 325 aa2.57□□□□□ -2
CHD1-211ENST00000514344 HCP5Q6MZN7 132 aa2.57□□□□□ -2
CHD1-211ENST00000514344 LYPD4Q6UWN0 246 aa2.57□□□□□ -2
CHD1-211ENST00000514344 ZNF836Q6ZNA1 936 aa2.57□□□□□ -2
CHD1-211ENST00000514344 CBLL1Q75N03 491 aa2.57□□□□□ -2
CHD1-211ENST00000514344 PXKQ7Z7A4 578 aa2.57□□□□□ -2
CHD1-211ENST00000514344 CLDN22Q8N7P3 220 aa2.57□□□□□ -2
CHD1-211ENST00000514344 LY6G5BQ8NDX9 201 aa2.57□□□□□ -2
CHD1-211ENST00000514344 OR5T2Q8NGG2 359 aa2.57□□□□□ -2
CHD1-211ENST00000514344 RPS4Y2Q8TD47 263 aa2.57□□□□□ -2
CHD1-211ENST00000514344 SLC38A4Q969I6 547 aa2.57□□□□□ -2
CHD1-211ENST00000514344 MTERF3Q96E29 417 aa2.57□□□□□ -2
CHD1-211ENST00000514344 DUS3LQ96G46 650 aaKnown RBP2.57□□□□□ -2
CHD1-211ENST00000514344 DMRTB1Q96MA1 342 aa2.57□□□□□ -2
CHD1-211ENST00000514344 CDRT15Q96T59 188 aa2.57□□□□□ -2
CHD1-211ENST00000514344 ECSITQ9BQ95 431 aa2.57□□□□□ -2
CHD1-211ENST00000514344 OR2H1Q9GZK4 316 aa2.57□□□□□ -2
CHD1-211ENST00000514344 WNT5BQ9H1J7 359 aa2.57□□□□□ -2
CHD1-211ENST00000514344 PTTG3PQ9NZH4 202 aa2.57□□□□□ -2
CHD1-211ENST00000514344 RNF7Q9UBF6 113 aa2.57□□□□□ -2
CHD1-211ENST00000514344 PITPNC1Q9UKF7 332 aa2.57□□□□□ -2
CHD1-211ENST00000514344 ANGPT4Q9Y264 503 aa2.57□□□□□ -2
CHD1-211ENST00000514344 IGKV1D-42A0A075B6H8 117 aa2.57□□□□□ -2
CHD1-211ENST00000514344 TRAV36DV7A0A075B6V5 113 aa2.57□□□□□ -2
CHD1-211ENST00000514344 A6NDX4 124 aa2.57□□□□□ -2
CHD1-211ENST00000514344 A6NLC8 198 aa2.57□□□□□ -2
CHD1-211ENST00000514344 AP4M1O00189 453 aa2.57□□□□□ -2
CHD1-211ENST00000514344 HMGN4O00479 90 aa2.57□□□□□ -2
CHD1-211ENST00000514344 PLPP3O14495 311 aa2.57□□□□□ -2
CHD1-211ENST00000514344 OR6A2O95222 327 aa2.57□□□□□ -2
CHD1-211ENST00000514344 TFF1P04155 84 aa2.57□□□□□ -2
CHD1-211ENST00000514344 ETFAP13804 333 aa2.57□□□□□ -2
CHD1-211ENST00000514344 SPNP16150 400 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms