RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 RAB35Q15286 201 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 TESK1Q15569 626 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 HIST2H3PS2Q5TEC6 136 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 ZNF544Q6NX49 715 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 ZNF322Q6U7Q0 402 aaPredicted RBP8.84□□□□□ -0.99
NEDD9-214ENST00000513989 LYPD4Q6UWN0 246 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 HIST2H3AQ71DI3 136 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 WFDC8Q8IUA0 241 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 LINC00346Q8IVM7 164 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 DMRTC2Q8IXT2 367 aaPredicted RBP8.84□□□□□ -0.99
NEDD9-214ENST00000513989 C1orf174Q8IYL3 243 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 ZNF679Q8IYX0 411 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 SLC30A7Q8NEW0 376 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 OR52I1Q8NGK6 324 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 AKR7LQ8NHP1 331 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 HAVCR2Q8TDQ0 301 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 HTRA1Q92743 480 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 SLAMF6Q96DU3 332 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 ZC3HAV1LQ96H79 300 aaKnown RBP8.84□□□□□ -0.99
NEDD9-214ENST00000513989 RADILQ96JH8 1075 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 NR1H4Q96RI1 486 aaPredicted RBP8.84□□□□□ -0.99
NEDD9-214ENST00000513989 DCLRE1CQ96SD1 692 aaKnown RBP8.84□□□□□ -0.99
NEDD9-214ENST00000513989 COQ7Q99807 217 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 ATF6BQ99941 703 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 SPOCK3Q9BQ16 436 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 ABHD6Q9BV23 337 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 C1QTNF6Q9BXI9 259 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 CCDC90BQ9GZT6 254 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 NIPAL2Q9H841 368 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 UBAP1Q9NZ09 502 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 CRNNQ9UBG3 495 aaPredicted RBP8.84□□□□□ -0.99
NEDD9-214ENST00000513989 ATPIF1Q9UII2 106 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 DIMT1Q9UNQ2 313 aaKnown RBP8.84□□□□□ -0.99
NEDD9-214ENST00000513989 ERGIC3Q9Y282 383 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 PCDHGB5Q9Y5G0 923 aa8.84□□□□□ -0.99
NEDD9-214ENST00000513989 KIAA1549Q9HCM3 1950 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 METTL15A6NJ78 407 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 ZNF878C9JN71 531 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 F5H5K5 113 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 J3QRE1 110 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 RGS10O43665 173 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 APOL3O95236 402 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 TNFAIP8O95379 198 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 IGKV3-15P01624 115 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 CRYAAP02489 173 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 CDK1P06493 297 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 CCNOP22674 350 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 HSD11B1P28845 292 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 RAD52P43351 418 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 HTR5AP47898 357 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 ZNF83P51522 516 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 IDH3GP51553 393 aaPredicted RBP8.83□□□□□ -1
NEDD9-214ENST00000513989 CHN2P52757 468 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 RIDAP52758 137 aaKnown RBP8.83□□□□□ -1
NEDD9-214ENST00000513989 HCCSP53701 268 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 NR1H2P55055 460 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 TPTEP56180 551 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 TUBA1BP68363 451 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 TUBA4AP68366 448 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 ROM1Q03395 351 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 MRPL28Q13084 256 aaKnown RBP8.83□□□□□ -1
NEDD9-214ENST00000513989 GALEQ14376 348 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 CCDC92Q53HC0 331 aaPredicted RBP8.83□□□□□ -1
NEDD9-214ENST00000513989 OTPQ5XKR4 325 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 ZNF774Q6NX45 483 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 MEX3BQ6ZN04 569 aaKnown RBP8.83□□□□□ -1
NEDD9-214ENST00000513989 AHSA2Q719I0 299 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 TUBA1AQ71U36 451 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 VASH1Q7L8A9 365 aaPredicted RBP8.83□□□□□ -1
NEDD9-214ENST00000513989 FAM220AQ7Z4H9 259 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 LHFPL3Q86UP9 236 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 FGFBP3Q8TAT2 258 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 RNF133Q8WVZ7 376 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 TBX5Q99593 518 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 KCNJ15Q99712 375 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 JAM3Q9BX67 310 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 WNT5BQ9H1J7 359 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 DUSP21Q9H596 190 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 CDH20Q9HBT6 801 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 ZNF224Q9NZL3 707 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 IKZF2Q9UKS7 526 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 SNX5Q9Y5X3 404 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 ALPK2Q86TB3 2170 aa8.83□□□□□ -1
NEDD9-214ENST00000513989 C5orf49A4QMS7 147 aa8.82□□□□□ -1
NEDD9-214ENST00000513989 ACOD1A6NK06 481 aa8.82□□□□□ -1
NEDD9-214ENST00000513989 SYNGR3O43761 229 aa8.82□□□□□ -1
NEDD9-214ENST00000513989 GOSR1O95249 250 aa8.82□□□□□ -1
NEDD9-214ENST00000513989 IGLV1-44P01699 117 aa8.82□□□□□ -1
NEDD9-214ENST00000513989 IGHA1P01876 353 aa8.82□□□□□ -1
NEDD9-214ENST00000513989 MT-ND5P03915 603 aa8.82□□□□□ -1
NEDD9-214ENST00000513989 RPSAP08865 295 aaKnown RBP8.82□□□□□ -1
NEDD9-214ENST00000513989 IGFBP2P18065 325 aa8.82□□□□□ -1
NEDD9-214ENST00000513989 CRYGSP22914 178 aa8.82□□□□□ -1
NEDD9-214ENST00000513989 TUBG1P23258 451 aa8.82□□□□□ -1
NEDD9-214ENST00000513989 APEX1P27695 318 aaKnown RBP8.82□□□□□ -1
NEDD9-214ENST00000513989 DCTDP32321 178 aa8.82□□□□□ -1
NEDD9-214ENST00000513989 RPS27P42677 84 aaKnown RBP8.82□□□□□ -1
NEDD9-214ENST00000513989 GBX2P52951 348 aaPredicted RBP8.82□□□□□ -1
NEDD9-214ENST00000513989 GABARAPL2P60520 117 aa8.82□□□□□ -1
NEDD9-214ENST00000513989 SLC35A2P78381 396 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms