RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 MAP6Q96JE9 813 aa6.58□□□□□ -1.36
HMGXB3-204ENST00000513318 RADILQ96JH8 1075 aa6.58□□□□□ -1.36
HMGXB3-204ENST00000513318 ATF6BQ99941 703 aa6.58□□□□□ -1.36
HMGXB3-204ENST00000513318 CDH20Q9HBT6 801 aa6.58□□□□□ -1.36
HMGXB3-204ENST00000513318 AASSQ9UDR5 926 aa6.58□□□□□ -1.36
HMGXB3-204ENST00000513318 LAMP5Q9UJQ1 280 aa6.58□□□□□ -1.36
HMGXB3-204ENST00000513318 RPL36Q9Y3U8 105 aaKnown RBP6.58□□□□□ -1.36
HMGXB3-204ENST00000513318 RNF115Q9Y4L5 304 aa6.58□□□□□ -1.36
HMGXB3-204ENST00000513318 PCDHGB1Q9Y5G3 927 aa6.58□□□□□ -1.36
HMGXB3-204ENST00000513318 ARID1AO14497 2285 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 IGHV2OR16-5A0A0B4J2B6 119 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 IRGMA1A4Y4 181 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 DPRXA6NFQ7 191 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 ZNF670-ZNF695F2Z2N8 137 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 ICMTO60725 284 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 OR2T7P0C7T2 308 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 ALOX5APP20292 161 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 APEX1P27695 318 aaKnown RBP6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 LOXP28300 417 aaPredicted RBP6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 OTX1P32242 354 aaPredicted RBP6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 ATP6V1E1P36543 226 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 SLC15A1P46059 708 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 GDI2P50395 445 aaKnown RBP6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 CXCR4P61073 352 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 GRB2P62993 217 aaKnown RBP6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 CSNK2BP67870 215 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 ACTC1P68032 377 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 ACTA1P68133 377 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 GALK2Q01415 458 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 SPOCK1Q08629 439 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 RAB40BQ12829 278 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 CDK5R2Q13319 367 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 SMN1Q16637 294 aaKnown RBP6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 KLHL22Q53GT1 634 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 KRT80Q6KB66 452 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 ADAM5Q6NVV9 412 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 TMEM154Q6P9G4 183 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 KCTD18Q6PI47 426 aaPredicted RBP6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 UNQ6126/PRO20091Q6UXV3 157 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 CPEB3Q8NE35 698 aaKnown RBP6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 OR10S1Q8NGN2 331 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 OR2T27Q8NH04 317 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 OR1F12Q8NHA8 337 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 RNF133Q8WVZ7 376 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 EDARADDQ8WWZ3 215 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 RNFT2Q96EX2 444 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 POM121L2Q96KW2 1035 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 CNBD2Q96M20 576 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 DCLRE1CQ96SD1 692 aaKnown RBP6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 TMEM204Q9BSN7 226 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 ABHD6Q9BV23 337 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 PNRC2Q9NPJ4 139 aaKnown RBP6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 DDX28Q9NUL7 540 aaKnown RBP6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 MRPS18AQ9NVS2 196 aaKnown RBP6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 DCHS2Q6V1P9 2916 aa6.57□□□□□ -1.36
HMGXB3-204ENST00000513318 LOC100509620A0A075B734 347 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 C5orf49A4QMS7 147 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 SHISA9B4DS77 424 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 ATP6V1G2-DDX39BF2Z307 99 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 J3QW42 95 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 M0R135 149 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 SLC1A7O00341 560 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 DENRO43583 198 aaKnown RBP6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 CTAG2O75638 210 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 APOL3O95236 402 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 FADS2O95864 444 aaKnown RBP6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 IGHA1P01876 353 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 APOC1P02654 83 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 PIPP12273 146 aaPredicted RBP6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 ZNF35P13682 527 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 HSD11B1P28845 292 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 PCSK6P29122 969 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 SSTR2P30874 369 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 CALCRP30988 508 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 RGS6P49758 472 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 TLE4Q04727 773 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 EGR3Q06889 387 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 TAF13Q15543 124 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 DEGS2Q6QHC5 323 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 ARL9Q6T311 187 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 SLC22A25Q6T423 547 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 ZNF322Q6U7Q0 402 aaPredicted RBP6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 ZNF704Q6ZNC4 412 aaPredicted RBP6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 TMEM200AQ86VY9 491 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 ACBD7Q8N6N7 88 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 NUP37Q8NFH4 326 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 KBTBD8Q8NFY9 601 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 OR10H4Q8NGA5 316 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 OR4F15Q8NGB8 312 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 THEM6Q8WUY1 208 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 ASB17Q8WXJ9 295 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 SPTSSAQ969W0 71 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 LGALS12Q96DT0 336 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 MRPL48Q96GC5 212 aaKnown RBP6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 ZNF799Q96GE5 643 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 OR8B4Q96RC9 309 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 AMELYQ99218 206 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 MYCBPQ99417 103 aaPredicted RBP6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 KCNJ15Q99712 375 aa6.56□□□□□ -1.36
HMGXB3-204ENST00000513318 COPS4Q9BT78 406 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms