RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 C19orf54Q5BKX5 351 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 RABL3Q5HYI8 236 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 FFAR4Q5NUL3 377 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 SYT6Q5T7P8 510 aaPredicted RBP4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 C22orf42Q6IC83 251 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 PNCKQ6P2M8 343 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 FAM131AQ6UXB0 335 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 CYP2R1Q6VVX0 501 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 FAM220AQ7Z4H9 259 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 CCDC190Q86UF4 302 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 LDLRAD3Q86YD5 345 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 PRSS35Q8N3Z0 413 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 NANOGP1Q8N7R0 232 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 ST6GALNAC3Q8NDV1 305 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 NOXO1Q8NFA2 376 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR5L1Q8NGL2 311 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR14K1Q8NGZ2 314 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR6F1Q8NGZ6 308 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 ABHD4Q8TB40 342 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 C1orf54Q8WWF1 131 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR8D1Q8WZ84 308 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZC3HAV1LQ96H79 300 aaKnown RBP4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 WDR92Q96MX6 357 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 AGAP4Q96P64 663 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 KCNA7Q96RP8 456 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 SPRTNQ9H040 489 aaPredicted RBP4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 DUSP15Q9H1R2 295 aaPredicted RBP4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 SYT4Q9H2B2 425 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 AKIP1Q9NQ31 210 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 RBM22Q9NW64 420 aaKnown RBP eCLIP4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 GLS2Q9UI32 602 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 DHDHQ9UQ10 334 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 ACTL7BQ9Y614 415 aa4.46□□□□□ -1.69
TRAPPC11-208ENST00000511955 KNL1Q8NG31 2342 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 SPTBN4Q9H254 2564 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 A0A1W2PPV9 198 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 IGLON5A6NGN9 336 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 PROB1E7EW31 1015 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 G3V2T6 193 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 I3L521 148 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 K7EP13 123 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 CDC7O00311 574 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 VCYO14598 125 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF780AO75290 641 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 ORM1P02763 201 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 CXCR1P25024 350 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 PSMA1P25786 263 aaKnown RBP4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 FOXN2P32314 431 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 CNR2P34972 360 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 OPRL1P41146 370 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 SERPINB10P48595 397 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 PRLHRP49683 370 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 RBP2P50120 134 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 PCBP3P57721 371 aaKnown RBP4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 EWSR1Q01844 656 aaKnown RBP eCLIP4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 IL10RBQ08334 325 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 RIPPLY1Q0D2K3 151 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 CNTN1Q12860 1018 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 TRAF3Q13114 568 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 TMEM176BQ3YBM2 270 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF776Q68DI1 518 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 TYW3Q6IPR3 259 aaKnown RBP4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 RPTNQ6XPR3 784 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 SSX7Q7RTT5 188 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 SSX6Q7RTT6 188 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 ABCA7Q8IZY2 2146 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 LINC00528Q8N1L1 170 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 STPG2Q8N412 459 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 PGBD5Q8N414 524 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 TMEM52Q8NDY8 209 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR10G3Q8NGC4 313 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR56A1Q8NGH5 318 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR6N2Q8NGY6 317 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR1F12Q8NHA8 337 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 MAPK15Q8TD08 544 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 EXTL1Q92935 676 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 FLYWCH2Q96CP2 140 aaKnown RBP4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 NTNG2Q96CW9 530 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZBED6CLQ96FA7 236 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 NOL4LQ96MY1 436 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 ALKBH3Q96Q83 286 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 SMIM14Q96QK8 99 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 HBEGFQ99075 208 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 GGACTQ9BVM4 153 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 ARV1Q9H2C2 271 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 NANOGQ9H9S0 305 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 PDFQ9HBH1 243 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 CDH20Q9HBT6 801 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 PAK1IP1Q9NWT1 392 aaPredicted RBP4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 IL36AQ9UHA7 158 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 B3GALT5Q9Y2C3 310 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 POLDIP2Q9Y2S7 368 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 DOCK4Q8N1I0 1966 aa4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 NYNRINQ9P2P1 1898 aaKnown RBP4.46□□□□□ -1.7
TRAPPC11-208ENST00000511955 TGIF2-C20orf24A0A0A6YYL0 155 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 TCRBV5S2A0A599 114 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 HSPB2A8KAH6 182 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR11H12B2RN74 326 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 H0YL77 283 aa4.45□□□□□ -1.7
TRAPPC11-208ENST00000511955 IGSF6O95976 241 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 1156.6 ms