RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 DANCRP0C864 163 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 GABRB3P28472 473 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 EIF2B2P49770 351 aaKnown RBP2.46□□□□□ -2.02
CLOCK-209ENST00000511124 GNG3P63215 75 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 MEF2CQ06413 473 aaPredicted RBP2.46□□□□□ -2.02
CLOCK-209ENST00000511124 TFF3Q07654 80 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 COX10Q12887 443 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 PLGLAQ15195 96 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 RCN1Q15293 331 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 ZBED5Q49AG3 693 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 SPANXN4Q5MJ08 99 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 ELFN2Q5R3F8 820 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 CLEC6AQ6EIG7 209 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 C6orf89Q6UWU4 347 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 DPY19L2P2Q6ZN68 376 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 RASSF6Q6ZTQ3 369 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 CARM1Q86X55 608 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 ARIH2OSQ8N7S6 290 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 ZFP41Q8N8Y5 198 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 ASCC1Q8N9N2 400 aaKnown RBP2.46□□□□□ -2.02
CLOCK-209ENST00000511124 OR4K5Q8NGD3 323 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 OR8H1Q8NGG4 311 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 CLDND2Q8NHS1 167 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 SLC7A13Q8TCU3 470 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 STON2Q8WXE9 905 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 CNOT9Q92600 299 aaKnown RBP2.46□□□□□ -2.02
CLOCK-209ENST00000511124 FLYWCH2Q96CP2 140 aaKnown RBP2.46□□□□□ -2.02
CLOCK-209ENST00000511124 BORCS8Q96FH0 119 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 EAF1Q96JC9 268 aaPredicted RBP2.46□□□□□ -2.02
CLOCK-209ENST00000511124 PRRC1Q96M27 445 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 NKX3-1Q99801 234 aaPredicted RBP2.46□□□□□ -2.02
CLOCK-209ENST00000511124 ATF6BQ99941 703 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 CHID1Q9BWS9 393 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 TXLNGYQ9BZA5 131 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 GSX1Q9H4S2 264 aaPredicted RBP2.46□□□□□ -2.02
CLOCK-209ENST00000511124 ELL3Q9HB65 397 aaPredicted RBP2.46□□□□□ -2.02
CLOCK-209ENST00000511124 NOX3Q9HBY0 568 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 PIGLQ9Y2B2 252 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 RBM7Q9Y580 266 aaKnown RBP2.46□□□□□ -2.02
CLOCK-209ENST00000511124 MED13LQ71F56 2210 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 USP24Q9UPU5 2620 aa2.46□□□□□ -2.02
CLOCK-209ENST00000511124 CACNA1CQ13936 2221 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 IGHV4-30-2A0A087WSY4 118 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 IGHV3-15A0A0B4J1V0 119 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 KIAA1324LA8MWY0 1029 aaPredicted RBP2.45□□□□□ -2.02
CLOCK-209ENST00000511124 CASQ2O14958 399 aaPredicted RBP2.45□□□□□ -2.02
CLOCK-209ENST00000511124 PIN1P1O15428 100 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 TXNL1O43396 289 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 BANF1O75531 89 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 KDM4BO94953 1096 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 NXPH2O95156 264 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 LYNP07948 512 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 ADH4P08319 380 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 CCDC159P0C7I6 412 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 B4GALT1P15291 398 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 GLRA1P23415 457 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 C21orf33P30042 268 aaPredicted RBP2.45□□□□□ -2.02
CLOCK-209ENST00000511124 MAGEA12P43365 314 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 KCNJ3P48549 501 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 UBA52P62987 128 aaKnown RBP2.45□□□□□ -2.02
CLOCK-209ENST00000511124 RIPPLY1Q0D2K3 151 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 MICAQ29983 383 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 C18orf21Q32NC0 220 aaPredicted RBP2.45□□□□□ -2.02
CLOCK-209ENST00000511124 ANKRD55Q3KP44 614 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 PLA1AQ53H76 456 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 PABPC1L2AQ5JQF8 200 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 FAM27BQ5VT28 67 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 COMTD1Q86VU5 262 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 FAM90A1Q86YD7 464 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 CALHM1Q8IU99 346 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 KIR3DL3Q8N743 410 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 TMEM52Q8NDY8 209 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 OR6Q1Q8NGQ2 317 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 MRAPQ8TCY5 172 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 CHPT1Q8WUD6 406 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 MSI2Q96DH6 328 aaKnown RBP2.45□□□□□ -2.02
CLOCK-209ENST00000511124 PAPOLGQ9BWT3 736 aaKnown RBP2.45□□□□□ -2.02
CLOCK-209ENST00000511124 VCX3BQ9H321 246 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 GSTO2Q9H4Y5 243 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 CXorf36Q9H7Y0 433 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 METTL8Q9H825 291 aaKnown RBP2.45□□□□□ -2.02
CLOCK-209ENST00000511124 AKTIPQ9H8T0 292 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 VCX3AQ9NNX9 186 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 MED4Q9NPJ6 270 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 DCAF13Q9NV06 445 aaKnown RBP2.45□□□□□ -2.02
CLOCK-209ENST00000511124 HEY2Q9UBP5 337 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 RIMS3Q9UJD0 308 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 SH2B3Q9UQQ2 575 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 TP53BP1Q12888 1972 aaPredicted RBP2.45□□□□□ -2.02
CLOCK-209ENST00000511124 TMEM72A0PK05 275 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 DPPA5A6NC42 116 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 SH2D7A6NKC9 451 aaPredicted RBP2.45□□□□□ -2.02
CLOCK-209ENST00000511124 CXorf49A8MYA2 514 aaPredicted RBP2.45□□□□□ -2.02
CLOCK-209ENST00000511124 ZNF878C9JN71 531 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 GADD45GO95257 159 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 MT-ND1P03886 318 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 RNASE1P07998 156 aaKnown RBP2.45□□□□□ -2.02
CLOCK-209ENST00000511124 CHRM2P08172 466 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 ANXA8P13928 327 aa2.45□□□□□ -2.02
CLOCK-209ENST00000511124 RHCEP18577 417 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms