RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 CSNK1A1P48729 337 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 DNASE1L1P49184 302 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 POU3F4P49335 361 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 EFNB2P52799 333 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 CAPZA1P52907 286 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 SUCLG1P53597 346 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 RAG2P55895 527 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 RRAS2P62070 204 aaPredicted RBP4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 CSNK2A1P68400 391 aaPredicted RBP4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 MFAP5Q13361 173 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 CAMK2DQ13557 499 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 ZFP69Q49AA0 526 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 ACER2Q5QJU3 275 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 C1orf100Q5SVJ3 147 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 CARD17Q5XLA6 110 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 B3GNTL1Q67FW5 361 aaPredicted RBP4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 GLT8D1Q68CQ7 371 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 JMJD6Q6NYC1 403 aaPredicted RBP4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 ZNF529Q6P280 563 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 ANKRD16Q6P6B7 361 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 LRFN4Q6PJG9 635 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 CORO6Q6QEF8 472 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 KLHL24Q6TFL4 600 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 BTN2A1Q7KYR7 527 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 RHOUQ7L0Q8 258 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 ADGRE4PQ86SQ3 457 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 BIVMQ86UB2 503 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 LIX1LQ8IVB5 337 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 OR9K2Q8NGE7 335 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 OR51A2Q8NGJ7 313 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 OR13C3Q8NGS6 347 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 OR52I2Q8NH67 350 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 KCNE4Q8WWG9 221 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 DEDD2Q8WXF8 326 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 AKAP1Q92667 903 aaKnown RBP eCLIP4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 GCDHQ92947 438 aaPredicted RBP4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 PPP1R14AQ96A00 147 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 SLC25A28Q96A46 364 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 FAM3DQ96BQ1 224 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 S100A16Q96FQ6 103 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 SCMH1Q96GD3 660 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 ZNF486Q96H40 463 aaPredicted RBP4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 ADGRG7Q96K78 797 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 GNRHR2Q96P88 292 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 OR2M2Q96R28 347 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 NAA11Q9BSU3 229 aaPredicted RBP4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 EDEM2Q9BV94 578 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 SF3B5Q9BWJ5 86 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 SRXN1Q9BYN0 137 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 PBOV1Q9GZY1 135 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 C1orf198Q9H425 327 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 RANGRFQ9HD47 186 aaPredicted RBP4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 DDX28Q9NUL7 540 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 MCUBQ9NWR8 336 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 P4HTMQ9NXG6 502 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 GLTPQ9NZD2 209 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 EMC3Q9P0I2 261 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 FOXD3Q9UJU5 478 aaPredicted RBP4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 POU2F3Q9UKI9 436 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 RCE1Q9Y256 329 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 FARSAQ9Y285 508 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 MRPS7Q9Y2R9 242 aaKnown RBP4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 PCDHGA1Q9Y5H4 931 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 N6AMT1Q9Y5N5 214 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 TTC28Q96AY4 2481 aa4.22□□□□□ -1.73
PDLIM5-214ENST00000510099 AHCTF1Q8WYP5 2266 aa4.21□□□□□ -1.73
PDLIM5-214ENST00000510099 CACNA1HO95180 2353 aa4.21□□□□□ -1.73
PDLIM5-214ENST00000510099 A0A0A6YYH2 397 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 A0A0A6YYJ9 748 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 A0A0J9YW62 118 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 A0A1B0GTI1 187 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 ANKRD20A5PA0PJZ0 165 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 A6NJ64 397 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 ZNF726A6NNF4 738 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 NPIPA2E9PIF3 369 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 NPIPA3F8WFD2 350 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 H7C417 338 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 P2RY10O00398 339 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 TNFSF11O14788 317 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 SMAD9O15198 467 aaKnown RBP4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 RER1O15258 196 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 LMX1BO60663 402 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 DHFRP00374 187 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 YES1P07947 543 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 QDPRP09417 244 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 ZNF806P0C7X5 589 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 GSTT2BP0CG30 244 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 RAB6AP20340 208 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 MSR1P21757 451 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 GIFP27352 417 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 HTR2CP28335 458 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 HSD11B1P28845 292 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 CDAP32320 146 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 EIF1AXP47813 144 aaKnown RBP4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 CCR6P51684 374 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 CLDN17P56750 224 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 RAB25P57735 213 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 RAC3P60763 192 aa4.21□□□□□ -1.74
PDLIM5-214ENST00000510099 LSM6P62312 80 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms