RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 UTP4Q969X6 686 aaKnown RBP13.75□□□□□ -0.21
PDLIM5-212ENST00000509333 COQ7Q99807 217 aa13.75□□□□□ -0.21
PDLIM5-212ENST00000509333 CDADC1Q9BWV3 514 aa13.75□□□□□ -0.21
PDLIM5-212ENST00000509333 MMADHCQ9H3L0 296 aaPredicted RBP13.75□□□□□ -0.21
PDLIM5-212ENST00000509333 TBC1D23Q9NUY8 699 aa13.75□□□□□ -0.21
PDLIM5-212ENST00000509333 ARMC1Q9NVT9 282 aa13.75□□□□□ -0.21
PDLIM5-212ENST00000509333 ATPIF1Q9UII2 106 aa13.75□□□□□ -0.21
PDLIM5-212ENST00000509333 MALRD1Q5VYJ5 2156 aa13.75□□□□□ -0.21
PDLIM5-212ENST00000509333 CRLF1O75462 422 aa13.74□□□□□ -0.21
PDLIM5-212ENST00000509333 IGHV4-31P0DP07 118 aa13.74□□□□□ -0.21
PDLIM5-212ENST00000509333 ZNF823P16415 610 aa13.74□□□□□ -0.21
PDLIM5-212ENST00000509333 ACHEP22303 614 aa13.74□□□□□ -0.21
PDLIM5-212ENST00000509333 LIPAP38571 399 aa13.74□□□□□ -0.21
PDLIM5-212ENST00000509333 CRYBB2P43320 205 aa13.74□□□□□ -0.21
PDLIM5-212ENST00000509333 CCL8P80075 99 aa13.74□□□□□ -0.21
PDLIM5-212ENST00000509333 CRMP1Q14194 572 aa13.74□□□□□ -0.21
PDLIM5-212ENST00000509333 COLCA1Q6ZS62 124 aa13.74□□□□□ -0.21
PDLIM5-212ENST00000509333 NAA40Q86UY6 237 aa13.74□□□□□ -0.21
PDLIM5-212ENST00000509333 LINC00346Q8IVM7 164 aa13.74□□□□□ -0.21
PDLIM5-212ENST00000509333 ZNF511Q8NB15 262 aa13.74□□□□□ -0.21
PDLIM5-212ENST00000509333 OR2AJ1Q8NGZ0 328 aa13.74□□□□□ -0.21
PDLIM5-212ENST00000509333 SNX33Q8WV41 574 aa13.74□□□□□ -0.21
PDLIM5-212ENST00000509333 NRBF2Q96F24 287 aa13.74□□□□□ -0.21
PDLIM5-212ENST00000509333 MAP6Q96JE9 813 aa13.74□□□□□ -0.21
PDLIM5-212ENST00000509333 CHODLQ9H9P2 273 aa13.74□□□□□ -0.21
PDLIM5-212ENST00000509333 PNRC2Q9NPJ4 139 aaKnown RBP13.74□□□□□ -0.21
PDLIM5-212ENST00000509333 POLR1DQ9Y2S0 133 aa13.74□□□□□ -0.21
PDLIM5-212ENST00000509333 LRP5LA4QPB2 252 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 TVP23AA6NH52 213 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 A8MV72 311 aaPredicted RBP13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 RP2O75695 350 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 IGHV1-46P01743 117 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 HLA-DQA2P01906 255 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 ADH4P08319 380 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 ANXA8P13928 327 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 KITLGP21583 273 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 GZMKP49863 264 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 ZNF81P51508 661 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 PPP2R2BQ00005 443 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 ECH1Q13011 328 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 CDK5R2Q13319 367 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 GINS1Q14691 196 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 TRIP10Q15642 601 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 TSTQ16762 297 aaKnown RBP13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 PCK2Q16822 640 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 TEX30Q5JUR7 227 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 CFAP77Q6ZQR2 320 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 IQCF1Q8N6M8 205 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 PROKR2Q8NFJ6 384 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 OR9Q1Q8NGQ5 310 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 MSI2Q96DH6 328 aaKnown RBP13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 COG8Q96MW5 612 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 PITX2Q99697 317 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 HDHD2Q9H0R4 259 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 WDR76Q9H967 626 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 CMC2Q9NRP2 79 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 CYSLTR2Q9NS75 346 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 KCNG2Q9UJ96 466 aa13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 PURGQ9UJV8 347 aaKnown RBP13.73□□□□□ -0.21
PDLIM5-212ENST00000509333 ZSCAN5BA6NJL1 495 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 ZNF593O00488 134 aaPredicted RBP13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 SPRY3O43610 288 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 CDC14BO60729 498 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 E2F6O75461 281 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 TIPRLO75663 272 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 IFNGP01579 166 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 MT-ND5P03915 603 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 GYPBP06028 91 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 CLUP10909 449 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 OSMP13725 252 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 SPI1P17947 270 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 FMO3P31513 532 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 GRK5P34947 590 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 CDK5Q00535 292 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 C6orf52Q5T4I8 152 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 LINC01590Q5TEZ4 76 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 SHQ1Q6PI26 577 aaKnown RBP13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 LYPD4Q6UWN0 246 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 HIPK1Q86Z02 1210 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 OR5L1Q8NGL2 311 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 OR10S1Q8NGN2 331 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 HPS1Q92902 700 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 APOBEC3DQ96AK3 386 aaPredicted RBP13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 DUS3LQ96G46 650 aaKnown RBP13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 SOX7Q9BT81 388 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 HCAR1Q9BXC0 346 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 C1QTNF5Q9BXJ0 243 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 MSL2Q9HCI7 577 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 ZNF275Q9NSD4 429 aaPredicted RBP13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 DECR2Q9NUI1 292 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 ZDHHC8Q9ULC8 765 aa13.72□□□□□ -0.21
PDLIM5-212ENST00000509333 PLSCR5A0PG75 271 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 F5H5K5 113 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 H3BN98 237 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 J3QW42 95 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 WNT9BO14905 357 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 HMGN1P05114 100 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 ACSM4P0C7M7 580 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 PSKH1P11801 424 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 RAC2P15153 192 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms