RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 SNX18Q96RF0 628 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 ZNF559Q9BR84 538 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 NUDT9Q9BW91 350 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 WWTR1Q9GZV5 400 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 PLCXD1Q9NUJ7 323 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 RHCGQ9UBD6 479 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 PLEKHB1Q9UF11 243 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-206ENST00000507875 TESQ9UGI8 421 aaKnown RBP6.32□□□□□ -1.4
CLCN3-206ENST00000507875 DHDHQ9UQ10 334 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 CHST2Q9Y4C5 530 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 MAB21L2Q9Y586 359 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 CHD8Q9HCK8 2581 aa6.32□□□□□ -1.4
CLCN3-206ENST00000507875 PLSCR5A0PG75 271 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 MCIDASD6RGH6 385 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 NOS1APO75052 506 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-206ENST00000507875 SEMA7AO75326 666 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 GABARAPO95166 117 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 FADS2O95864 444 aaKnown RBP6.31□□□□□ -1.4
CLCN3-206ENST00000507875 TBXA2RP21731 343 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 NR4A1P22736 598 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 IDH2P48735 452 aaKnown RBP6.31□□□□□ -1.4
CLCN3-206ENST00000507875 AQP6Q13520 282 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 GPR157Q5UAW9 335 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 ZNF770Q6IQ21 691 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-206ENST00000507875 NPSR1Q6W5P4 371 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 IDO2Q6ZQW0 420 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 AHSA2Q719I0 299 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 GPALPP1Q8IXQ4 340 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 ZNF808Q8N4W9 903 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-206ENST00000507875 COMMD1Q8N668 190 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 BCORP1Q8N888 145 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 AQP11Q8NBQ7 271 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 C19orf18Q8NEA5 215 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 SPSB1Q96BD6 273 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 YIPF6Q96EC8 236 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 C7orf50Q9BRJ6 194 aaKnown RBP6.31□□□□□ -1.4
CLCN3-206ENST00000507875 COPS4Q9BT78 406 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 NMNAT1Q9HAN9 279 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-206ENST00000507875 MCCC2Q9HCC0 563 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 KRCC1Q9NPI7 259 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-206ENST00000507875 UBQLN4Q9NRR5 601 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 PSORS1C1Q9UIG5 152 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 FARSAQ9Y285 508 aaKnown RBP6.31□□□□□ -1.4
CLCN3-206ENST00000507875 OR10H1Q9Y4A9 318 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 MRPS18BQ9Y676 258 aaKnown RBP6.31□□□□□ -1.4
CLCN3-206ENST00000507875 KCNE3Q9Y6H6 103 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 CEP295Q9C0D2 2601 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 EPG5Q9HCE0 2579 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 TRBV4-1A0A0J9YWV2 114 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 FAM230AA0A1W2PPH8 454 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 A0A1W2PPV4 95 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 ITGB1BP1O14713 200 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 OGG1O15527 345 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 PLPP2O43688 288 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 EIF4E2O60573 245 aaKnown RBP6.31□□□□□ -1.4
CLCN3-206ENST00000507875 TSPAN2O60636 221 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 KLF7O75840 302 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-206ENST00000507875 HPP00738 406 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 PSMB9P28065 219 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 RBMS1P29558 406 aaKnown RBP6.31□□□□□ -1.4
CLCN3-206ENST00000507875 BDKRB2P30411 391 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 IFNGR2P38484 337 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 SLC6A8P48029 635 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 PTGES3Q15185 160 aaKnown RBP6.31□□□□□ -1.4
CLCN3-206ENST00000507875 BOD1L2Q8IYS8 172 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 FAM89BQ8N5H3 189 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 TMEM185AQ8NFB2 350 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 MYDGFQ969H8 173 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 FAM46BQ96A09 425 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 MIB2Q96AX9 1013 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 BSCL2Q96G97 398 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-206ENST00000507875 ABHD14AQ9BUJ0 271 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 OR8D2Q9GZM6 311 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 GPN1Q9HCN4 374 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-206ENST00000507875 CHMP1AQ9HD42 196 aaPredicted RBP6.31□□□□□ -1.4
CLCN3-206ENST00000507875 PARPBPQ9NWS1 579 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 ZNF226Q9NYT6 803 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 NAGKQ9UJ70 344 aa6.31□□□□□ -1.4
CLCN3-206ENST00000507875 SPTBP11277 2137 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 IGHV1-45A0A0A0MS14 117 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 SLC22A1O15245 554 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 CNOT3O75175 753 aaKnown RBP6.3□□□□□ -1.4
CLCN3-206ENST00000507875 UGT2B17O75795 530 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 NXPH2O95156 264 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 IGF2P01344 180 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 IFNA6P05013 189 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 H2AFB1P0C5Y9 115 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 ELAVL4P26378 380 aaKnown RBP6.3□□□□□ -1.4
CLCN3-206ENST00000507875 PSMB6P28072 239 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 C21orf33P30042 268 aaPredicted RBP6.3□□□□□ -1.4
CLCN3-206ENST00000507875 CD80P33681 288 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 PTGER4P35408 488 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 CRISP1P54107 249 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 CDC42P60953 191 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 ST3GAL3Q11203 375 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 FOXL1Q12952 345 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 DGCR6Q14129 220 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 SSX2Q16385 188 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 YIF1BQ5BJH7 314 aa6.3□□□□□ -1.4
CLCN3-206ENST00000507875 UBE2UQ5VVX9 321 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms