RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 CRCT1Q9UGL9 99 aa1.72□□□□□ -2.13
LINC00616-202ENST00000505874 DNAJC12Q9UKB3 198 aa1.72□□□□□ -2.13
LINC00616-202ENST00000505874 UNC13CQ8NB66 2214 aa1.72□□□□□ -2.13
LINC00616-202ENST00000505874 KIAA1671Q9BY89 1806 aa1.72□□□□□ -2.13
LINC00616-202ENST00000505874 SPTBN5Q9NRC6 3674 aaKnown RBP1.72□□□□□ -2.13
LINC00616-202ENST00000505874 PIEZO1Q92508 2521 aa1.72□□□□□ -2.13
LINC00616-202ENST00000505874 TRIOO75962 3097 aa1.72□□□□□ -2.13
LINC00616-202ENST00000505874 MIA3Q5JRA6 1907 aa1.72□□□□□ -2.13
LINC00616-202ENST00000505874 TNRC18O15417 2968 aaPredicted RBP1.71□□□□□ -2.14
LINC00616-202ENST00000505874 MYO16Q9Y6X6 1858 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 ATP8B3O60423 1300 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 SF3B1O75533 1304 aaKnown RBP eCLIP1.71□□□□□ -2.14
LINC00616-202ENST00000505874 PRUNE2Q8WUY3 3088 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 WDR87Q6ZQQ6 2873 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 RP1P56715 2156 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 PATJQ8NI35 1801 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 C2orf16Q68DN1 1984 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 RNF103-CHMP3A0A140T963 221 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 BTNL10A8MVZ5 291 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 A8MXQ7 604 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 F8VZ95 297 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 H3BNH8 94 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 LSM8O95777 96 aaKnown RBP1.71□□□□□ -2.14
LINC00616-202ENST00000505874 GYPCP04921 128 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 CALB1P05937 261 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 DESP17661 470 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 NT5EP21589 574 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 WARSP23381 471 aaKnown RBP1.71□□□□□ -2.14
LINC00616-202ENST00000505874 CYP2F1P24903 491 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 TNFSF9P41273 254 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 CCL23P55773 120 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 MYL6P60660 151 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 POLR2FP61218 127 aaKnown RBP1.71□□□□□ -2.14
LINC00616-202ENST00000505874 INCA1Q0VD86 236 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 SPA17Q15506 151 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 HSP90AA4PQ58FG1 418 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 C1orf220Q5T0J3 134 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 LIN9Q5TKA1 542 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 H2AFVQ71UI9 128 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 DEFB128Q7Z7B8 93 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 ZSCAN30Q86W11 494 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 CDR2LQ86X02 465 aaPredicted RBP1.71□□□□□ -2.14
LINC00616-202ENST00000505874 RNF10Q8N5U6 811 aaKnown RBP1.71□□□□□ -2.14
LINC00616-202ENST00000505874 OR5B17Q8NGF7 314 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 C2orf15Q8WU43 125 aaKnown RBP1.71□□□□□ -2.14
LINC00616-202ENST00000505874 ZNF606Q8WXB4 792 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 FAM3CQ92520 227 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 SH3YL1Q96HL8 342 aaPredicted RBP1.71□□□□□ -2.14
LINC00616-202ENST00000505874 SENP8Q96LD8 212 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 HSFY1Q96LI6 401 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 TMEM237Q96Q45 408 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 ACBD6Q9BR61 282 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 CRACR2AQ9BSW2 395 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 TRIM62Q9BVG3 475 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 CAPS2Q9BXY5 557 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 TSGA10Q9BZW7 698 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 LHX5Q9H2C1 402 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 RANBP3Q9H6Z4 567 aaPredicted RBP1.71□□□□□ -2.14
LINC00616-202ENST00000505874 MRPL47Q9HD33 250 aaKnown RBP1.71□□□□□ -2.14
LINC00616-202ENST00000505874 CISHQ9NSE2 258 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 THUMPD1Q9NXG2 353 aaKnown RBP1.71□□□□□ -2.14
LINC00616-202ENST00000505874 ZNRD1Q9P1U0 126 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 CD84Q9UIB8 345 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 CDH9Q9ULB4 789 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 CARHSP1Q9Y2V2 147 aaKnown RBP1.71□□□□□ -2.14
LINC00616-202ENST00000505874 HES2Q9Y543 173 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 TPRP12270 2363 aaKnown RBP1.71□□□□□ -2.14
LINC00616-202ENST00000505874 OBSL1O75147 1896 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 PLXNA4Q9HCM2 1894 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 PHF3Q92576 2039 aaKnown RBP1.71□□□□□ -2.14
LINC00616-202ENST00000505874 COL4A6Q14031 1691 aa1.71□□□□□ -2.14
LINC00616-202ENST00000505874 URB1O60287 2271 aaKnown RBP1.7□□□□□ -2.14
LINC00616-202ENST00000505874 AHCTF1Q8WYP5 2266 aa1.7□□□□□ -2.14
LINC00616-202ENST00000505874 HELZP42694 1942 aaKnown RBP1.7□□□□□ -2.14
LINC00616-202ENST00000505874 ATG2AQ2TAZ0 1938 aa1.7□□□□□ -2.14
LINC00616-202ENST00000505874 NUP214P35658 2090 aaPredicted RBP1.7□□□□□ -2.14
LINC00616-202ENST00000505874 SPTBN2O15020 2390 aa1.7□□□□□ -2.14
LINC00616-202ENST00000505874 SZT2Q5T011 3432 aa1.7□□□□□ -2.14
LINC00616-202ENST00000505874 CIB4A0PJX0 185 aa1.7□□□□□ -2.14
LINC00616-202ENST00000505874 C5orf67F2Z3F1 127 aa1.7□□□□□ -2.14
LINC00616-202ENST00000505874 XPO1O14980 1071 aaKnown RBP1.7□□□□□ -2.14
LINC00616-202ENST00000505874 TAPBPO15533 448 aa1.7□□□□□ -2.14
LINC00616-202ENST00000505874 ZNF189O75820 626 aaPredicted RBP1.7□□□□□ -2.14
LINC00616-202ENST00000505874 TM7SF2O76062 418 aa1.7□□□□□ -2.14
LINC00616-202ENST00000505874 IGHG4P01861 327 aa1.7□□□□□ -2.14
LINC00616-202ENST00000505874 DEKP35659 375 aaKnown RBP1.7□□□□□ -2.14
LINC00616-202ENST00000505874 SLC1A1P43005 524 aa1.7□□□□□ -2.14
LINC00616-202ENST00000505874 MAGEA1P43355 309 aa1.7□□□□□ -2.14
LINC00616-202ENST00000505874 OR1G1P47890 313 aa1.7□□□□□ -2.14
LINC00616-202ENST00000505874 P2RY1P47900 373 aa1.7□□□□□ -2.14
LINC00616-202ENST00000505874 SLC11A1P49279 550 aa1.7□□□□□ -2.14
LINC00616-202ENST00000505874 TUFMP49411 452 aaKnown RBP1.7□□□□□ -2.14
LINC00616-202ENST00000505874 PLXNA3P51805 1871 aa1.7□□□□□ -2.14
LINC00616-202ENST00000505874 HADHBP55084 474 aaKnown RBP1.7□□□□□ -2.14
LINC00616-202ENST00000505874 RPL10AP62906 217 aaKnown RBP1.7□□□□□ -2.14
LINC00616-202ENST00000505874 BST2Q10589 180 aaKnown RBP1.7□□□□□ -2.14
LINC00616-202ENST00000505874 ASPHQ12797 758 aa1.7□□□□□ -2.14
LINC00616-202ENST00000505874 PLD1Q13393 1074 aa1.7□□□□□ -2.14
LINC00616-202ENST00000505874 CARD16Q5EG05 197 aa1.7□□□□□ -2.14
LINC00616-202ENST00000505874 CLLU1OSQ5K130 101 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms