RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 OCIAD1Q9NX40 245 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 B9D1Q9UPM9 204 aa4.31□□□□□ -1.72
NDFIP1-202ENST00000503388 MEIKINA0A087WXM9 373 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 LOC107986453A0A1B0GWG9 222 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 OR5B21A6NL26 309 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 LRRC30A6NM36 301 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 LGALS8O00214 317 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 PSMD9O00233 223 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 ABCD4O14678 606 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 PPP1R2P9O14990 202 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 MT-ND4LP03901 98 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 SNRPBP14678 240 aaKnown RBP4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 MMP9P14780 707 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 FSTP19883 344 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 BLVRBP30043 206 aaPredicted RBP4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 PGGT1BP53609 377 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 RPL18Q07020 188 aaKnown RBP4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 ZNF616Q08AN1 781 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 PRICKLE4Q2TBC4 344 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 DMKNQ6E0U4 476 aaPredicted RBP4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 PAQR6Q6TCH4 344 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 NHLRC1Q6VVB1 395 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 B3GLCTQ6Y288 498 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 C1orf87Q8N0U7 546 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 OR4D9Q8NGE8 314 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 OR1S2Q8NGQ3 325 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 RHBDD1Q8TEB9 315 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 FAM216AQ8WUB2 273 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 TAAR8Q969N4 342 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 APOBEC3DQ96AK3 386 aaPredicted RBP4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 APH1AQ96BI3 265 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 SPACA9Q96E40 222 aaPredicted RBP4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 SCARF2Q96GP6 870 aaPredicted RBP4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 EGLN1Q9GZT9 426 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 ZNF576Q9H609 170 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 SYNPO2LQ9H987 977 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 HRASLSQ9HDD0 168 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 SLC22A13Q9Y226 551 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 ZNF816-ZNF321PA0A0X1KG74 233 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 AQP7P3A6NL99 342 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 ZNF705EA8MWA4 302 aaPredicted RBP4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 DHHO43323 396 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 CDC123O75794 336 aaPredicted RBP4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 CD160O95971 181 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 HOXD4P09016 255 aaPredicted RBP4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 CHRNB1P11230 501 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 ATF1P18846 271 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 AADACP22760 399 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 PCSK6P29122 969 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 CD200P41217 278 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 CRYBB2P43320 205 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 CLDN17P56750 224 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 NKX6-1P78426 367 aaPredicted RBP4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 FCN2Q15485 313 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 ACKR1Q16570 336 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 DEFB133Q30KQ1 61 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 TMEM176BQ3YBM2 270 aaPredicted RBP4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 TEX30Q5JUR7 227 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 EXOSC6Q5RKV6 272 aaKnown RBP4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 GLYATL3Q5SZD4 288 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 HIST2H3PS2Q5TEC6 136 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 MOB3CQ70IA8 216 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 TMUB2Q71RG4 321 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 Q7L0L9 218 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 HSD17B13Q7Z5P4 300 aaPredicted RBP4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 MRGPREQ86SM8 312 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 OR10R2Q8NGX6 335 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 OR6X1Q8NH79 312 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 C4orf45Q96LM5 186 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 CXCL16Q9H2A7 254 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 IKZF5Q9H5V7 419 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 PLEKHA3Q9HB20 300 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 MBNL1Q9NR56 388 aaKnown RBP4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 LRFN1Q9P244 771 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 ZNF346Q9UL40 294 aaKnown RBP4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 COL5A1P20908 1838 aaPredicted RBP4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 CCDC187A0A096LP49 1063 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 A0A1W2PPV4 95 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 TMEM202A6NGA9 273 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 BCL2L11O43521 198 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 FRS3O43559 492 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 MBPP02686 304 aaPredicted RBP4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 MT-ND4P03905 459 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 RPA2P15927 270 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 HIST1H1CP16403 213 aaKnown RBP4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 GABRB1P18505 474 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 SRD5A2P31213 254 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 OTX2P32243 289 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 ASCL1P50553 236 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 ARG2P78540 354 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 FABP5Q01469 135 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 PMPCAQ10713 525 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 RUNX2Q13950 521 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 IL13RA2Q14627 380 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 CEBPEQ15744 281 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 RHBDD2Q6NTF9 364 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 DPPA3Q6W0C5 159 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 DCXRQ7Z4W1 244 aa4.3□□□□□ -1.72
NDFIP1-202ENST00000503388 HPSE2Q8WWQ2 592 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms