RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 SLCO1C1Q9NYB5 712 aa6.75□□□□□ -1.33
CDC42-205ENST00000498236 SPRR3Q9UBC9 169 aa6.75□□□□□ -1.33
CDC42-205ENST00000498236 LIPGQ9Y5X9 500 aa6.75□□□□□ -1.33
CDC42-205ENST00000498236 ASPMQ8IZT6 3477 aa6.75□□□□□ -1.33
CDC42-205ENST00000498236 AKAP13Q12802 2813 aa6.75□□□□□ -1.33
CDC42-205ENST00000498236 MED12Q93074 2177 aa6.75□□□□□ -1.33
CDC42-205ENST00000498236 FREM3P0C091 2139 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 TRAV1-2A0A0B4J238 106 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 PNMA8CA0A1B0GUJ8 204 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 OR14I1A6ND48 311 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 TMEM212A6NML5 194 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 OR4C45A6NMZ5 311 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 MKRN2OSH3BPM6 223 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 RPL36A-HNRNPH2H7BZ11 118 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 MAGEB4O15481 346 aaPredicted RBP6.74□□□□□ -1.33
CDC42-205ENST00000498236 RRP8O43159 456 aaKnown RBP6.74□□□□□ -1.33
CDC42-205ENST00000498236 SRSF10O75494 262 aaKnown RBP6.74□□□□□ -1.33
CDC42-205ENST00000498236 ZFPL1O95159 310 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 MPZL1O95297 269 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 FCGR2AP12318 317 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 NPR2P20594 1047 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 MSR1P21757 451 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 EDNRAP25101 427 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 RPS19P39019 145 aaKnown RBP6.74□□□□□ -1.33
CDC42-205ENST00000498236 OPRL1P41146 370 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 RPS27P42677 84 aaKnown RBP6.74□□□□□ -1.33
CDC42-205ENST00000498236 GUCA1AP43080 201 aaPredicted RBP6.74□□□□□ -1.33
CDC42-205ENST00000498236 MTNR1BP49286 362 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 RORCP51449 518 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 ZNF84P51523 738 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 RIDAP52758 137 aaKnown RBP6.74□□□□□ -1.33
CDC42-205ENST00000498236 NANOS3P60323 173 aaKnown RBP6.74□□□□□ -1.33
CDC42-205ENST00000498236 RPS11P62280 158 aaKnown RBP eCLIP6.74□□□□□ -1.33
CDC42-205ENST00000498236 HIST1H3AP68431 136 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 MRPS34P82930 218 aaKnown RBP6.74□□□□□ -1.33
CDC42-205ENST00000498236 SRYQ05066 204 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 SLC3A1Q07837 685 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 ALKBH1Q13686 389 aaKnown RBP6.74□□□□□ -1.33
CDC42-205ENST00000498236 ZNF404Q494X3 552 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 PHYHD1Q5SRE7 291 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 HIST2H3PS2Q5TEC6 136 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 FAM27BQ5VT28 67 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 ZNF544Q6NX49 715 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 HIST2H3AQ71DI3 136 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 AAED1Q7RTV5 226 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 DCXRQ7Z4W1 244 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 TPRA1Q86W33 373 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 YIPF7Q8N8F6 280 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 OR6Q1Q8NGQ2 317 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 OR2G2Q8NGZ5 317 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 MCFD2Q8NI22 146 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 ABHD3Q8WU67 409 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 THRSPQ92748 146 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 NABP1Q96AH0 204 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 C4orf45Q96LM5 186 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 FOXN4Q96NZ1 517 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 DCLRE1CQ96SD1 692 aaKnown RBP6.74□□□□□ -1.33
CDC42-205ENST00000498236 WACQ9BTA9 647 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 HDHD5Q9BXW7 423 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 TTTY10Q9BZA0 68 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 DEFB127Q9H1M4 99 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 C1orf198Q9H425 327 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 NIPAL2Q9H841 368 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 GLRX2Q9NS18 164 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 IKZF2Q9UKS7 526 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 GRIP1Q9Y3R0 1128 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 LHFPL6Q9Y693 200 aa6.74□□□□□ -1.33
CDC42-205ENST00000498236 DCHS1Q96JQ0 3298 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 TRBV5-5A0A0J9YX44 114 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 IQCMA0A1B0GVH7 501 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 A0A1W2PPL8 197 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 LRRTM2O43300 516 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 ARL6IP5O75915 188 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 CDRT1O95170 752 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 RAF1P04049 648 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 YES1P07947 543 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 DBHP09172 617 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 UCHL1P09936 223 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 CFL1P23528 166 aaKnown RBP6.73□□□□□ -1.33
CDC42-205ENST00000498236 CTSSP25774 331 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 SDC2P34741 201 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 PSMB10P40306 273 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 TMPRSS3P57727 454 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 PMP22Q01453 160 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 ROR2Q01974 943 aaKnown RBP6.73□□□□□ -1.33
CDC42-205ENST00000498236 DYNC1I2Q13409 638 aaKnown RBP6.73□□□□□ -1.33
CDC42-205ENST00000498236 ACSM3Q53FZ2 586 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 ZMAT1Q5H9K5 638 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 LRRN1Q6UXK5 716 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 ZNF627Q7L945 461 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 CHMP1BQ7LBR1 199 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 CEACAM19Q7Z692 300 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 KRT77Q7Z794 578 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 CATSPERDQ86XM0 798 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 GPR137CQ8N3F9 429 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 PRSS35Q8N3Z0 413 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 RBMXL3Q8N7X1 1067 aaKnown RBP6.73□□□□□ -1.33
CDC42-205ENST00000498236 IL17RDQ8NFM7 739 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 OR10S1Q8NGN2 331 aa6.73□□□□□ -1.33
CDC42-205ENST00000498236 OR2AJ1Q8NGZ0 328 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms