RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 ECH1Q13011 328 aa20.55■□□□□ 0.88
HLA-C-209ENST00000495835 FBXW12Q6X9E4 464 aa20.55■□□□□ 0.88
HLA-C-209ENST00000495835 PEG10Q86TG7 708 aaKnown RBP20.55■□□□□ 0.88
HLA-C-209ENST00000495835 DHFR2Q86XF0 187 aa20.55■□□□□ 0.88
HLA-C-209ENST00000495835 TEX29Q8N6K0 151 aa20.55■□□□□ 0.88
HLA-C-209ENST00000495835 OR52L1Q8NGH7 329 aa20.55■□□□□ 0.88
HLA-C-209ENST00000495835 OR4K13Q8NH42 304 aa20.55■□□□□ 0.88
HLA-C-209ENST00000495835 CCL17Q92583 94 aa20.55■□□□□ 0.88
HLA-C-209ENST00000495835 APOBEC3DQ96AK3 386 aaPredicted RBP20.55■□□□□ 0.88
HLA-C-209ENST00000495835 CMBLQ96DG6 245 aa20.55■□□□□ 0.88
HLA-C-209ENST00000495835 C1orf21Q9H246 121 aa20.55■□□□□ 0.88
HLA-C-209ENST00000495835 RPRD1BQ9NQG5 326 aaKnown RBP20.55■□□□□ 0.88
HLA-C-209ENST00000495835 HIF1ANQ9NWT6 349 aa20.55■□□□□ 0.88
HLA-C-209ENST00000495835 KCNG2Q9UJ96 466 aa20.55■□□□□ 0.88
HLA-C-209ENST00000495835 PRPF19Q9UMS4 504 aaKnown RBP20.55■□□□□ 0.88
HLA-C-209ENST00000495835 CDH10Q9Y6N8 788 aa20.55■□□□□ 0.88
HLA-C-209ENST00000495835 TCRBV5S2A0A599 114 aa20.54■□□□□ 0.88
HLA-C-209ENST00000495835 DYNC1I1O14576 645 aa20.54■□□□□ 0.88
HLA-C-209ENST00000495835 SURF4O15260 269 aa20.54■□□□□ 0.88
HLA-C-209ENST00000495835 ATP6V1B2P21281 511 aa20.54■□□□□ 0.88
HLA-C-209ENST00000495835 TNFAIP6P98066 277 aaPredicted RBP20.54■□□□□ 0.88
HLA-C-209ENST00000495835 GK3PQ14409 553 aa20.54■□□□□ 0.88
HLA-C-209ENST00000495835 RASSF6Q6ZTQ3 369 aa20.54■□□□□ 0.88
HLA-C-209ENST00000495835 RFLNBQ8N5W9 214 aa20.54■□□□□ 0.88
HLA-C-209ENST00000495835 MSL2Q9HCI7 577 aa20.54■□□□□ 0.88
HLA-C-209ENST00000495835 IL19Q9UHD0 177 aa20.54■□□□□ 0.88
HLA-C-209ENST00000495835 OR6C68A6NDL8 312 aa20.53■□□□□ 0.88
HLA-C-209ENST00000495835 SRP14P37108 136 aaKnown RBP20.53■□□□□ 0.88
HLA-C-209ENST00000495835 FAM98BQ52LJ0 330 aaKnown RBP20.53■□□□□ 0.88
HLA-C-209ENST00000495835 AVPI1Q5T686 147 aa20.53■□□□□ 0.88
HLA-C-209ENST00000495835 ZNF770Q6IQ21 691 aaPredicted RBP20.53■□□□□ 0.88
HLA-C-209ENST00000495835 OR4C15Q8NGM1 316 aa20.53■□□□□ 0.88
HLA-C-209ENST00000495835 SLC7A6Q92536 515 aa20.53■□□□□ 0.88
HLA-C-209ENST00000495835 CDADC1Q9BWV3 514 aa20.53■□□□□ 0.88
HLA-C-209ENST00000495835 POFUT1Q9H488 388 aa20.53■□□□□ 0.88
HLA-C-209ENST00000495835 CACNG2Q9Y698 323 aa20.53■□□□□ 0.88
HLA-C-209ENST00000495835 BHLHE40O14503 412 aa20.52■□□□□ 0.88
HLA-C-209ENST00000495835 DEAF1O75398 565 aaPredicted RBP20.52■□□□□ 0.88
HLA-C-209ENST00000495835 CCNB2O95067 398 aa20.52■□□□□ 0.88
HLA-C-209ENST00000495835 IGHV2-5P01817 119 aa20.52■□□□□ 0.88
HLA-C-209ENST00000495835 SCGB2A2Q13296 93 aa20.52■□□□□ 0.88
HLA-C-209ENST00000495835 MEP1BQ16820 701 aa20.52■□□□□ 0.88
HLA-C-209ENST00000495835 LIPNQ5VXI9 398 aa20.52■□□□□ 0.88
HLA-C-209ENST00000495835 SLC27A4Q6P1M0 643 aa20.52■□□□□ 0.88
HLA-C-209ENST00000495835 COLCA1Q6ZS62 124 aa20.52■□□□□ 0.88
HLA-C-209ENST00000495835 OR52E2Q8NGJ4 325 aa20.52■□□□□ 0.88
HLA-C-209ENST00000495835 OR2AJ1Q8NGZ0 328 aa20.52■□□□□ 0.88
HLA-C-209ENST00000495835 BTBD10Q9BSF8 475 aa20.52■□□□□ 0.88
HLA-C-209ENST00000495835 CYB5R1Q9UHQ9 305 aa20.52■□□□□ 0.88
HLA-C-209ENST00000495835 IFNL4K9M1U5 179 aa20.51■□□□□ 0.87
HLA-C-209ENST00000495835 GPANK1O95872 356 aa20.51■□□□□ 0.87
HLA-C-209ENST00000495835 GASTP01350 101 aa20.51■□□□□ 0.87
HLA-C-209ENST00000495835 DBHP09172 617 aa20.51■□□□□ 0.87
HLA-C-209ENST00000495835 T-ENOLP0DO92 83 aa20.51■□□□□ 0.87
HLA-C-209ENST00000495835 HOXB6P17509 224 aaKnown RBP20.51■□□□□ 0.87
HLA-C-209ENST00000495835 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.51■□□□□ 0.87
HLA-C-209ENST00000495835 KRTAP27-1Q3LI81 207 aa20.51■□□□□ 0.87
HLA-C-209ENST00000495835 OTPQ5XKR4 325 aa20.51■□□□□ 0.87
HLA-C-209ENST00000495835 SLC18B1Q6NT16 456 aa20.51■□□□□ 0.87
HLA-C-209ENST00000495835 Q6ZR03 302 aa20.51■□□□□ 0.87
HLA-C-209ENST00000495835 PHC2Q8IXK0 858 aa20.51■□□□□ 0.87
HLA-C-209ENST00000495835 SDR9C7Q8NEX9 313 aa20.51■□□□□ 0.87
HLA-C-209ENST00000495835 ASB9Q96DX5 294 aa20.51■□□□□ 0.87
HLA-C-209ENST00000495835 DDOQ99489 341 aa20.51■□□□□ 0.87
HLA-C-209ENST00000495835 C1QTNF5Q9BXJ0 243 aa20.51■□□□□ 0.87
HLA-C-209ENST00000495835 BAIAP2Q9UQB8 552 aa20.51■□□□□ 0.87
HLA-C-209ENST00000495835 STAB1Q9NY15 2570 aa20.51■□□□□ 0.87
HLA-C-209ENST00000495835 DYSFO75923 2080 aa20.5■□□□□ 0.87
HLA-C-209ENST00000495835 GATA3P23771 443 aa20.5■□□□□ 0.87
HLA-C-209ENST00000495835 RSPO1Q2MKA7 263 aaPredicted RBP20.5■□□□□ 0.87
HLA-C-209ENST00000495835 OR2T5Q6IEZ7 315 aa20.5■□□□□ 0.87
HLA-C-209ENST00000495835 RINLQ6ZS11 566 aa20.5■□□□□ 0.87
HLA-C-209ENST00000495835 LNX2Q8N448 690 aa20.5■□□□□ 0.87
HLA-C-209ENST00000495835 ZNF283Q8N7M2 679 aa20.5■□□□□ 0.87
HLA-C-209ENST00000495835 OR8G5Q8NG78 346 aa20.5■□□□□ 0.87
HLA-C-209ENST00000495835 OR2Z1Q8NG97 314 aa20.5■□□□□ 0.87
HLA-C-209ENST00000495835 OR9Q2Q8NGE9 314 aa20.5■□□□□ 0.87
HLA-C-209ENST00000495835 OR2T4Q8NH00 348 aa20.5■□□□□ 0.87
HLA-C-209ENST00000495835 OR2T29Q8NH02 315 aa20.5■□□□□ 0.87
HLA-C-209ENST00000495835 DGCR6LQ9BY27 220 aa20.5■□□□□ 0.87
HLA-C-209ENST00000495835 EGLN3Q9H6Z9 239 aa20.5■□□□□ 0.87
HLA-C-209ENST00000495835 REEP1Q9H902 201 aa20.5■□□□□ 0.87
HLA-C-209ENST00000495835 METRNQ9UJH8 293 aa20.5■□□□□ 0.87
HLA-C-209ENST00000495835 NPTNQ9Y639 398 aa20.5■□□□□ 0.87
HLA-C-209ENST00000495835 PNPP00491 289 aa20.49■□□□□ 0.87
HLA-C-209ENST00000495835 HLA-DQA2P01906 255 aa20.49■□□□□ 0.87
HLA-C-209ENST00000495835 ZNF823P16415 610 aa20.49■□□□□ 0.87
HLA-C-209ENST00000495835 SELEP16581 610 aa20.49■□□□□ 0.87
HLA-C-209ENST00000495835 GGT2P36268 569 aa20.49■□□□□ 0.87
HLA-C-209ENST00000495835 MS4A2Q01362 244 aa20.49■□□□□ 0.87
HLA-C-209ENST00000495835 MICAQ29983 383 aa20.49■□□□□ 0.87
HLA-C-209ENST00000495835 CLEC12AQ5QGZ9 265 aa20.49■□□□□ 0.87
HLA-C-209ENST00000495835 SLC35F1Q5T1Q4 408 aa20.49■□□□□ 0.87
HLA-C-209ENST00000495835 CORO6Q6QEF8 472 aa20.49■□□□□ 0.87
HLA-C-209ENST00000495835 OR13G1Q8NGZ3 307 aa20.49■□□□□ 0.87
HLA-C-209ENST00000495835 PITX2Q99697 317 aa20.49■□□□□ 0.87
HLA-C-209ENST00000495835 ATF6BQ99941 703 aa20.49■□□□□ 0.87
HLA-C-209ENST00000495835 GAL3ST1Q99999 423 aa20.49■□□□□ 0.87
HLA-C-209ENST00000495835 LPAR2Q9HBW0 351 aa20.49■□□□□ 0.87
HLA-C-209ENST00000495835 G6PC2Q9NQR9 355 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms