RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 B9A039 149 aa16.7■□□□□ 0.26
HDAC4-212ENST00000495497 F5H5K5 113 aa16.7■□□□□ 0.26
HDAC4-212ENST00000495497 NDUFS7O75251 213 aa16.7■□□□□ 0.26
HDAC4-212ENST00000495497 PTH2RP49190 550 aa16.7■□□□□ 0.26
HDAC4-212ENST00000495497 RPS23P62266 143 aaKnown RBP16.7■□□□□ 0.26
HDAC4-212ENST00000495497 OGFRL1Q5TC84 451 aaPredicted RBP16.7■□□□□ 0.26
HDAC4-212ENST00000495497 LCN1P1Q5VSP4 162 aa16.7■□□□□ 0.26
HDAC4-212ENST00000495497 NXNL2Q5VZ03 156 aa16.7■□□□□ 0.26
HDAC4-212ENST00000495497 NAA40Q86UY6 237 aa16.7■□□□□ 0.26
HDAC4-212ENST00000495497 OR8J1Q8NGP2 316 aa16.7■□□□□ 0.26
HDAC4-212ENST00000495497 SLC25A40Q8TBP6 338 aa16.7■□□□□ 0.26
HDAC4-212ENST00000495497 ABHD6Q9BV23 337 aa16.7■□□□□ 0.26
HDAC4-212ENST00000495497 FAM118AQ9NWS6 357 aa16.7■□□□□ 0.26
HDAC4-212ENST00000495497 SMPD3Q9NY59 655 aaPredicted RBP16.7■□□□□ 0.26
HDAC4-212ENST00000495497 DNAJC27Q9NZQ0 273 aa16.7■□□□□ 0.26
HDAC4-212ENST00000495497 ATPIF1Q9UII2 106 aa16.7■□□□□ 0.26
HDAC4-212ENST00000495497 DUSP13Q9UII6 198 aa16.7■□□□□ 0.26
HDAC4-212ENST00000495497 ANKRD17O75179 2603 aaKnown RBP16.7■□□□□ 0.26
HDAC4-212ENST00000495497 RTTNQ86VV8 2226 aa16.7■□□□□ 0.26
HDAC4-212ENST00000495497 TEX15Q9BXT5 2789 aa16.7■□□□□ 0.26
HDAC4-212ENST00000495497 PLCE1Q9P212 2302 aa16.69■□□□□ 0.26
HDAC4-212ENST00000495497 H0YHG0 523 aa16.69■□□□□ 0.26
HDAC4-212ENST00000495497 CASQ2O14958 399 aaPredicted RBP16.69■□□□□ 0.26
HDAC4-212ENST00000495497 MPV17P39210 176 aa16.69■□□□□ 0.26
HDAC4-212ENST00000495497 PPP1CBP62140 327 aa16.69■□□□□ 0.26
HDAC4-212ENST00000495497 SLC34A1Q06495 639 aa16.69■□□□□ 0.26
HDAC4-212ENST00000495497 EFNB3Q15768 340 aa16.69■□□□□ 0.26
HDAC4-212ENST00000495497 ALKBH6Q3KRA9 238 aa16.69■□□□□ 0.26
HDAC4-212ENST00000495497 KRTAP27-1Q3LI81 207 aa16.69■□□□□ 0.26
HDAC4-212ENST00000495497 SHFQ7M4L6 423 aa16.69■□□□□ 0.26
HDAC4-212ENST00000495497 ZNF582Q96NG8 517 aaPredicted RBP16.69■□□□□ 0.26
HDAC4-212ENST00000495497 DOK1Q99704 481 aa16.69■□□□□ 0.26
HDAC4-212ENST00000495497 FOXC2Q99958 501 aa16.69■□□□□ 0.26
HDAC4-212ENST00000495497 OR2J1Q9GZK6 312 aa16.69■□□□□ 0.26
HDAC4-212ENST00000495497 ELOVL3Q9HB03 270 aa16.69■□□□□ 0.26
HDAC4-212ENST00000495497 ZNF701Q9NV72 531 aaPredicted RBP16.69■□□□□ 0.26
HDAC4-212ENST00000495497 IMPAD1Q9NX62 359 aa16.69■□□□□ 0.26
HDAC4-212ENST00000495497 KLHDC2Q9Y2U9 406 aa16.69■□□□□ 0.26
HDAC4-212ENST00000495497 STARD10Q9Y365 291 aa16.69■□□□□ 0.26
HDAC4-212ENST00000495497 LOC100130705A0A1B0GUX0 176 aa16.68■□□□□ 0.26
HDAC4-212ENST00000495497 ICMTO60725 284 aa16.68■□□□□ 0.26
HDAC4-212ENST00000495497 ACSM4P0C7M7 580 aa16.68■□□□□ 0.26
HDAC4-212ENST00000495497 SNRPD2P62316 118 aaKnown RBP16.68■□□□□ 0.26
HDAC4-212ENST00000495497 ECH1Q13011 328 aa16.68■□□□□ 0.26
HDAC4-212ENST00000495497 MAD2L1BPQ15013 274 aaPredicted RBP16.68■□□□□ 0.26
HDAC4-212ENST00000495497 TMEM255AQ5JRV8 349 aa16.68■□□□□ 0.26
HDAC4-212ENST00000495497 ARL9Q6T311 187 aa16.68■□□□□ 0.26
HDAC4-212ENST00000495497 SLC16A9Q7RTY1 509 aa16.68■□□□□ 0.26
HDAC4-212ENST00000495497 ZCCHC24Q8N2G6 241 aaKnown RBP16.68■□□□□ 0.26
HDAC4-212ENST00000495497 OTOSQ8NHW6 89 aa16.68■□□□□ 0.26
HDAC4-212ENST00000495497 SYNPRQ8TBG9 265 aa16.68■□□□□ 0.26
HDAC4-212ENST00000495497 THEM6Q8WUY1 208 aa16.68■□□□□ 0.26
HDAC4-212ENST00000495497 MARS2Q96GW9 593 aaKnown RBP16.68■□□□□ 0.26
HDAC4-212ENST00000495497 COPS4Q9BT78 406 aa16.68■□□□□ 0.26
HDAC4-212ENST00000495497 GSX2Q9BZM3 304 aa16.68■□□□□ 0.26
HDAC4-212ENST00000495497 ZNF250P15622 560 aa16.67■□□□□ 0.26
HDAC4-212ENST00000495497 ANOS1P23352 680 aa16.67■□□□□ 0.26
HDAC4-212ENST00000495497 ALDH3B1P43353 468 aa16.67■□□□□ 0.26
HDAC4-212ENST00000495497 PRKXP51817 358 aa16.67■□□□□ 0.26
HDAC4-212ENST00000495497 ATP5J2P56134 94 aa16.67■□□□□ 0.26
HDAC4-212ENST00000495497 TAF13Q15543 124 aa16.67■□□□□ 0.26
HDAC4-212ENST00000495497 GID4Q8IVV7 300 aa16.67■□□□□ 0.26
HDAC4-212ENST00000495497 PACRGLQ8N7B6 248 aa16.67■□□□□ 0.26
HDAC4-212ENST00000495497 NRG4Q8WWG1 115 aa16.67■□□□□ 0.26
HDAC4-212ENST00000495497 DCLRE1CQ96SD1 692 aaKnown RBP16.67■□□□□ 0.26
HDAC4-212ENST00000495497 RNPEPL1Q9HAU8 725 aa16.67■□□□□ 0.26
HDAC4-212ENST00000495497 DDX28Q9NUL7 540 aaKnown RBP16.67■□□□□ 0.26
HDAC4-212ENST00000495497 TBCCD1Q9NVR7 557 aa16.67■□□□□ 0.26
HDAC4-212ENST00000495497 PMF1-BGLAPU3KQ54 211 aa16.67■□□□□ 0.26
HDAC4-212ENST00000495497 SLC22A31A6NKX4 558 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 ZNF878C9JN71 531 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 M0R135 149 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 ENTPD6O75354 484 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 APOL3O95236 402 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 IGHV4-39P01824 125 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 LYNP07948 512 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 ADRA2AP08913 450 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 PAX1P15863 534 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 TPTEP56180 551 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 GGTLC2Q14390 218 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 TESK1Q15569 626 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 ZNF718Q3SXZ3 478 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 KRTAP1-3Q8IUG1 177 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 ENTHD1Q8IYW4 607 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 LRRC75A-AS1Q8N1F1 130 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 ZNF555Q8NEP9 628 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 KLF14Q8TD94 323 aaPredicted RBP16.66■□□□□ 0.26
HDAC4-212ENST00000495497 RNF133Q8WVZ7 376 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 TRUB1Q8WWH5 349 aaKnown RBP16.66■□□□□ 0.26
HDAC4-212ENST00000495497 IPCEF1Q8WWN9 437 aaPredicted RBP16.66■□□□□ 0.26
HDAC4-212ENST00000495497 TRMT61AQ96FX7 289 aaKnown RBP16.66■□□□□ 0.26
HDAC4-212ENST00000495497 ZNF799Q96GE5 643 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 CNN2Q99439 309 aaKnown RBP16.66■□□□□ 0.26
HDAC4-212ENST00000495497 VRK1Q99986 396 aaPredicted RBP16.66■□□□□ 0.26
HDAC4-212ENST00000495497 TTTY10Q9BZA0 68 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 CXXC4Q9H2H0 198 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 ADGRL4Q9HBW9 690 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 PTTG3PQ9NZH4 202 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 TAAR3PQ9P1P4 343 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 LAMP5Q9UJQ1 280 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms