RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 RFKQ969G6 155 aa10.41□□□□□ -0.74
CSNK1E-213ENST00000495232 MRPL24Q96A35 216 aaKnown RBP10.41□□□□□ -0.74
CSNK1E-213ENST00000495232 SLAMF6Q96DU3 332 aa10.41□□□□□ -0.74
CSNK1E-213ENST00000495232 MAP6Q96JE9 813 aa10.41□□□□□ -0.74
CSNK1E-213ENST00000495232 HRASLS5Q96KN8 279 aa10.41□□□□□ -0.74
CSNK1E-213ENST00000495232 RDH12Q96NR8 316 aa10.41□□□□□ -0.74
CSNK1E-213ENST00000495232 VRK1Q99986 396 aaPredicted RBP10.41□□□□□ -0.74
CSNK1E-213ENST00000495232 SYT3Q9BQG1 590 aa10.41□□□□□ -0.74
CSNK1E-213ENST00000495232 COPS4Q9BT78 406 aa10.41□□□□□ -0.74
CSNK1E-213ENST00000495232 GSX2Q9BZM3 304 aa10.41□□□□□ -0.74
CSNK1E-213ENST00000495232 VCXQ9H320 206 aa10.41□□□□□ -0.74
CSNK1E-213ENST00000495232 DYNLRB1Q9NP97 96 aa10.41□□□□□ -0.74
CSNK1E-213ENST00000495232 TBCCD1Q9NVR7 557 aa10.41□□□□□ -0.74
CSNK1E-213ENST00000495232 SMPD3Q9NY59 655 aaPredicted RBP10.41□□□□□ -0.74
CSNK1E-213ENST00000495232 GMPPBQ9Y5P6 360 aa10.41□□□□□ -0.74
CSNK1E-213ENST00000495232 ZNF878C9JN71 531 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 OVOL3O00110 214 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 SELENOFO60613 162 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 MT-ND5P03915 603 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 LYNP07948 512 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 DBHP09172 617 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 SLC2A5P22732 501 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 TUBG1P23258 451 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 HSD11B1P28845 292 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 NAA10P41227 235 aaPredicted RBP10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 SLC15A1P46059 708 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 SLC6A9P48067 706 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 NUDT6P53370 316 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 PPP1CBP62140 327 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 PCK2Q16822 640 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 SWI5Q1ZZU3 235 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 SPATA46Q5T0L3 261 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 LPCAT4Q643R3 524 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 C11orf71Q6IPW1 123 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 TIGD4Q8IY51 512 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 ZNF101Q8IZC7 436 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 PACRGLQ8N7B6 248 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 ZNF454Q8N9F8 522 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 THEM6Q8WUY1 208 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 SNX33Q8WV41 574 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 IGFBPL1Q8WX77 278 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 MRPL37Q9BZE1 423 aaKnown RBP10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 MARCH7Q9H992 704 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 BARX1Q9HBU1 254 aaPredicted RBP10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 TUBG2Q9NRH3 451 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 ZNF701Q9NV72 531 aaPredicted RBP10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 SLCO1C1Q9NYB5 712 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 LAMP5Q9UJQ1 280 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 MAST4O15021 2626 aa10.4□□□□□ -0.74
CSNK1E-213ENST00000495232 LOC100130705A0A1B0GUX0 176 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 SNTNA6NMZ2 147 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 H7C417 338 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 J3QW42 95 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 M0R135 149 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 M0R233 179 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 ICMTO60725 284 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 APOC1P02654 83 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 MRPL3P09001 348 aaKnown RBP10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 ZNF250P15622 560 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 PAX1P15863 534 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 PEX2P28328 305 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 ATP6V1E1P36543 226 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 ERVS71-1P61550 626 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 GRB2P62993 217 aaKnown RBP10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 EFNB1P98172 346 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 NKPD1Q17RQ9 610 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 MST1LQ2TV78 715 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 AADACL4Q5VUY2 407 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 SHEQ5VZ18 495 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 RFPL4BQ6ZWI9 263 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 SPATC1Q76KD6 591 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 SLC16A9Q7RTY1 509 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 BCDIN3DQ7Z5W3 292 aaKnown RBP10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 OTOSQ8NHW6 89 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 SLC25A40Q8TBP6 338 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 APOBEC3DQ96AK3 386 aaPredicted RBP10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 ZNF799Q96GE5 643 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 MBOAT4Q96T53 435 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 CNN2Q99439 309 aaKnown RBP10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 ABHD6Q9BV23 337 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 OR2J1Q9GZK6 312 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 YIPF3Q9GZM5 350 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 RAB1BQ9H0U4 201 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 MS4A5Q9H3V2 200 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 PNRC2Q9NPJ4 139 aaKnown RBP10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 DDX28Q9NUL7 540 aaKnown RBP10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 TAAR3PQ9P1P4 343 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 WARS2Q9UGM6 360 aaKnown RBP10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 TMEM14AQ9Y6G1 99 aa10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 MAP1AP78559 2803 aaPredicted RBP10.39□□□□□ -0.75
CSNK1E-213ENST00000495232 VPS13CQ709C8 3753 aa10.38□□□□□ -0.75
CSNK1E-213ENST00000495232 PLSCR5A0PG75 271 aa10.38□□□□□ -0.75
CSNK1E-213ENST00000495232 CCDC182A6NF36 153 aa10.38□□□□□ -0.75
CSNK1E-213ENST00000495232 H3BSA7 217 aa10.38□□□□□ -0.75
CSNK1E-213ENST00000495232 MPZL2O60487 215 aa10.38□□□□□ -0.75
CSNK1E-213ENST00000495232 NGFP01138 241 aa10.38□□□□□ -0.75
CSNK1E-213ENST00000495232 LCATP04180 440 aa10.38□□□□□ -0.75
CSNK1E-213ENST00000495232 H2BFMP0C1H6 154 aa10.38□□□□□ -0.75
CSNK1E-213ENST00000495232 PPOXP50336 477 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms