RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 SLC25A44Q96H78 314 aaPredicted RBP13.76□□□□□ -0.21
SDF4-207ENST00000494748 LPAR3Q9UBY5 353 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 LRP12Q9Y561 859 aa13.76□□□□□ -0.21
SDF4-207ENST00000494748 C9JQL5 133 aa13.75□□□□□ -0.21
SDF4-207ENST00000494748 ACTR1BP42025 376 aa13.75□□□□□ -0.21
SDF4-207ENST00000494748 ACTR1AP61163 376 aa13.75□□□□□ -0.21
SDF4-207ENST00000494748 SPOCK1Q08629 439 aa13.75□□□□□ -0.21
SDF4-207ENST00000494748 FUT7Q11130 342 aa13.75□□□□□ -0.21
SDF4-207ENST00000494748 RNASE10Q5GAN6 216 aaKnown RBP13.75□□□□□ -0.21
SDF4-207ENST00000494748 C1QL3Q5VWW1 255 aa13.75□□□□□ -0.21
SDF4-207ENST00000494748 RBMS3Q6XE24 437 aaKnown RBP13.75□□□□□ -0.21
SDF4-207ENST00000494748 TRAPPC6BQ86SZ2 158 aa13.75□□□□□ -0.21
SDF4-207ENST00000494748 ASB17Q8WXJ9 295 aa13.75□□□□□ -0.21
SDF4-207ENST00000494748 SMIM8Q96KF7 97 aa13.75□□□□□ -0.21
SDF4-207ENST00000494748 CRB3Q9BUF7 120 aa13.75□□□□□ -0.21
SDF4-207ENST00000494748 LOC101059948A0A1B0GTJ6 334 aa13.75□□□□□ -0.21
SDF4-207ENST00000494748 SSX5O60225 188 aa13.75□□□□□ -0.21
SDF4-207ENST00000494748 ICOSLGO75144 302 aa13.75□□□□□ -0.21
SDF4-207ENST00000494748 RAB6AP20340 208 aa13.75□□□□□ -0.21
SDF4-207ENST00000494748 HRH1P35367 487 aa13.75□□□□□ -0.21
SDF4-207ENST00000494748 BTG2P78543 158 aa13.75□□□□□ -0.21
SDF4-207ENST00000494748 KCTD9Q7L273 389 aa13.75□□□□□ -0.21
SDF4-207ENST00000494748 RD3Q7Z3Z2 195 aa13.75□□□□□ -0.21
SDF4-207ENST00000494748 CASTOR1Q8WTX7 329 aa13.75□□□□□ -0.21
SDF4-207ENST00000494748 TRIM43Q96BQ3 446 aaPredicted RBP13.75□□□□□ -0.21
SDF4-207ENST00000494748 G6PC2Q9NQR9 355 aa13.75□□□□□ -0.21
SDF4-207ENST00000494748 NUDT21O43809 227 aaKnown RBP13.74□□□□□ -0.21
SDF4-207ENST00000494748 PAX6P26367 422 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 SLC29A4Q7RTT9 530 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 TAF8Q7Z7C8 310 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 ADAMTS17Q8TE56 1095 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 NUDCD2Q8WVJ2 157 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 CYYR1Q96J86 154 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 ADAM19Q9H013 955 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 TREM1Q9NP99 234 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 C5orf52A6NGY3 159 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 ST6GAL1P15907 406 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 ZNF761Q86XN6 746 aaPredicted RBP13.74□□□□□ -0.21
SDF4-207ENST00000494748 NANPQ8TBE9 248 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 DNAJA3Q96EY1 480 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 OR10A5Q9H207 317 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 PLA2G2EQ9NZK7 142 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 GTF2A1LQ9UNN4 478 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 C17orf51A8MQB3 221 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 HOXC4P09017 264 aaPredicted RBP13.74□□□□□ -0.21
SDF4-207ENST00000494748 CCINQ13939 588 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 ERV3-1Q14264 604 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 C1orf53Q5VUE5 145 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 FAM160A2Q8N612 972 aaPredicted RBP13.74□□□□□ -0.21
SDF4-207ENST00000494748 OR10R2Q8NGX6 335 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 TMEM230Q96A57 120 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 ABHD6Q9BV23 337 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 RHOFQ9HBH0 211 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 ZNF304Q9HCX3 659 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 OR5AC2Q9NZP5 309 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 DOCK8Q8NF50 2099 aa13.74□□□□□ -0.21
SDF4-207ENST00000494748 TIMP1P01033 207 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 POU2F2P09086 479 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 CTLA4P16410 223 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 CAV2P51636 162 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 SNRPEP62304 92 aaKnown RBP13.73□□□□□ -0.21
SDF4-207ENST00000494748 ADAM8P78325 824 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 DEFB110Q30KQ9 67 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 SLC18B1Q6NT16 456 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 CHRDL2Q6WN34 429 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 ETV3LQ6ZN32 361 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 MED25Q71SY5 747 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 HOGA1Q86XE5 327 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 PRSS37A4D1T9 235 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 CD5P06127 495 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 SPARCP09486 303 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 AKR1C4P17516 323 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 CNTD2Q9H8S5 307 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 SEBOXQ9HB31 216 aaPredicted RBP13.73□□□□□ -0.21
SDF4-207ENST00000494748 GSN-AS1Q9NRJ2 163 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 CKLFQ9UBR5 152 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 PCDHGA1Q9Y5H4 931 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 SZT2Q5T011 3432 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 A0A0J9YY10 115 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 UBE2CO00762 179 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 VAMP1P23763 118 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 CTNNB1P35222 781 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 AIMP2Q13155 320 aaKnown RBP13.73□□□□□ -0.21
SDF4-207ENST00000494748 NFATC4Q14934 902 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 ZNF776Q68DI1 518 aaPredicted RBP13.73□□□□□ -0.21
SDF4-207ENST00000494748 TANGO2Q6ICL3 276 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 SLC16A13Q7RTY0 426 aa13.73□□□□□ -0.21
SDF4-207ENST00000494748 VSX1Q9NZR4 365 aaPredicted RBP13.73□□□□□ -0.21
SDF4-207ENST00000494748 ZNF705EA8MWA4 302 aaPredicted RBP13.72□□□□□ -0.21
SDF4-207ENST00000494748 EIF1AYO14602 144 aaKnown RBP13.72□□□□□ -0.21
SDF4-207ENST00000494748 ISG15P05161 165 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 LPAR6P43657 344 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 EIF1AXP47813 144 aaKnown RBP13.72□□□□□ -0.21
SDF4-207ENST00000494748 CCR4P51679 360 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 NOGQ13253 232 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 EIF2B1Q14232 305 aaKnown RBP13.72□□□□□ -0.21
SDF4-207ENST00000494748 SWI5Q1ZZU3 235 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 FAM209BQ5JX69 171 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 TMEM200AQ86VY9 491 aa13.72□□□□□ -0.21
SDF4-207ENST00000494748 JAGN1Q8N5M9 183 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms