RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 NAA40Q86UY6 237 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 DEFB107AQ8IZN7 70 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 PGAM4Q8N0Y7 254 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 OR6V1Q8N148 313 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 ATG16L2Q8NAA4 619 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 GNPDA2Q8TDQ7 276 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 HAVCR1Q96D42 359 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 RAB39BQ96DA2 213 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 DHRS1Q96LJ7 313 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 GPX7Q96SL4 187 aaPredicted RBP8.12□□□□□ -1.11
MSH5-218ENST00000494646 GAL3ST1Q99999 423 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 IFT27Q9BW83 186 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 FN3KQ9H479 309 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 KRCC1Q9NPI7 259 aaPredicted RBP8.12□□□□□ -1.11
MSH5-218ENST00000494646 G6PC2Q9NQR9 355 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 TAGLN3Q9UI15 199 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 MAGEL2Q9UJ55 1249 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 TMCC3Q9ULS5 477 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 POLR1DQ9Y2S0 133 aa8.12□□□□□ -1.11
MSH5-218ENST00000494646 IGHV3-64DA0A0J9YX35 117 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 OR6C68A6NDL8 312 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 OR6C6A6NF89 314 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 H0YL77 283 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 PNPP00491 289 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 RENP00797 406 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 GSTM3P21266 225 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 KITLGP21583 273 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 NOS3P29474 1203 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 CRABP1P29762 137 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 SLC6A6P31641 620 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 SLC3A1Q07837 685 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 KCNMB1Q16558 191 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 RSPO1Q2MKA7 263 aaPredicted RBP8.11□□□□□ -1.11
MSH5-218ENST00000494646 DNM1P34Q6PK57 102 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 PEG10Q86TG7 708 aaKnown RBP8.11□□□□□ -1.11
MSH5-218ENST00000494646 ADCK1Q86TW2 530 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 LINC00346Q8IVM7 164 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 ZDHHC21Q8IVQ6 265 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 NPEPL1Q8NDH3 523 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 SDR9C7Q8NEX9 313 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 GJC3Q8NFK1 279 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 OR52E2Q8NGJ4 325 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 FANK1Q8TC84 345 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 ITLN1Q8WWA0 313 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 DIRC2Q96SL1 478 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 CDADC1Q9BWV3 514 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 TMPRSS13Q9BYE2 586 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 EGLN3Q9H6Z9 239 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 WDR76Q9H967 626 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 RPRD1BQ9NQG5 326 aaKnown RBP8.11□□□□□ -1.11
MSH5-218ENST00000494646 ARL2BPQ9Y2Y0 163 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 NPTNQ9Y639 398 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 LHFPL6Q9Y693 200 aa8.11□□□□□ -1.11
MSH5-218ENST00000494646 TENM1Q9UKZ4 2725 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 IGLV1-36A0A0B4J1U3 117 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 A0A0G2JMP0 313 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 A0A0X1KG70 313 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 B2RBV5 119 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 F5H5K5 113 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 H3BSA7 217 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 ZNF205O95201 554 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 HLA-DQA2P01906 255 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 CD55P08174 381 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 ADH4P08319 380 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 TNFSF4P23510 183 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 ZFP36P26651 326 aaKnown RBP8.1□□□□□ -1.11
MSH5-218ENST00000494646 GSSP48637 474 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 HIST1H3AP68431 136 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.1□□□□□ -1.11
MSH5-218ENST00000494646 CLEC12AQ5QGZ9 265 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 HIST2H3PS2Q5TEC6 136 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 DCAF12L2Q5VW00 463 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 PGBD2Q6P3X8 592 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 C16orf89Q6UX73 402 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 HIST2H3AQ71DI3 136 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 OR4M2Q8NGB6 313 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 OR9Q2Q8NGE9 314 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 OR5L1Q8NGL2 311 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 ZNF420Q8TAQ5 688 aaPredicted RBP8.1□□□□□ -1.11
MSH5-218ENST00000494646 ST7LQ8TDW4 575 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 OR2V2Q96R30 315 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 PITX2Q99697 317 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 C7orf69Q9H7B7 122 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 IL1RAPQ9NPH3 570 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 MMP26Q9NRE1 261 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 TMEM106BQ9NUM4 274 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 CGGBP1Q9UFW8 167 aaPredicted RBP8.1□□□□□ -1.11
MSH5-218ENST00000494646 IL19Q9UHD0 177 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 PCDHB10Q9UN67 800 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 PPP1R3CQ9UQK1 317 aa8.1□□□□□ -1.11
MSH5-218ENST00000494646 TVP23AA6NH52 213 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 TNFRSF11BO00300 401 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 ARPC3O15145 178 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 DCTN3O75935 186 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 GASTP01350 101 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 LCATP04180 440 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 HLA-DPB1P04440 258 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 RAC2P15153 192 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 TNFRSF1AP19438 455 aa8.09□□□□□ -1.11
MSH5-218ENST00000494646 TUBG1P23258 451 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms