RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 EFCAB9A8MZ26 197 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 NDUFS8O00217 210 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 SURF4O15260 269 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 PRODHO43272 600 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 GABARAPO95166 117 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 DBTP11182 482 aaKnown RBP11.37□□□□□ -0.59
ERCC3-209ENST00000494464 GLRXP35754 106 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 EVX1P49640 407 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 MRPS34P82930 218 aaKnown RBP11.37□□□□□ -0.59
ERCC3-209ENST00000494464 GALK2Q01415 458 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 LOXL1Q08397 574 aaPredicted RBP11.37□□□□□ -0.59
ERCC3-209ENST00000494464 ST3GAL4Q11206 333 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 SNAPC1Q16533 368 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 TMEM53Q6P2H8 277 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 ZNF367Q7RTV3 350 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 OAFQ86UD1 273 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 MEX3DQ86XN8 651 aaKnown RBP11.37□□□□□ -0.59
ERCC3-209ENST00000494464 OR4Q3Q8NH05 313 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 ZNF519Q8TB69 540 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 ZFAND2BQ8WV99 257 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 MRPL24Q96A35 216 aaKnown RBP11.37□□□□□ -0.59
ERCC3-209ENST00000494464 YIPF6Q96EC8 236 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 SH3GL3Q99963 347 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 RACGAP1Q9H0H5 632 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 OR52D1Q9H346 318 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 MRPS18AQ9NVS2 196 aaKnown RBP11.37□□□□□ -0.59
ERCC3-209ENST00000494464 DNAJC27Q9NZQ0 273 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 WARS2Q9UGM6 360 aaKnown RBP11.37□□□□□ -0.59
ERCC3-209ENST00000494464 BAIAP2Q9UQB8 552 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 CMAHPQ9Y471 501 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 UGT2A1Q9Y4X1 527 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 CSPG4Q6UVK1 2322 aa11.37□□□□□ -0.59
ERCC3-209ENST00000494464 TRAV27A0A087WT01 109 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 A6NIZ1 184 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 INAFM1C9JVW0 142 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 TLX2O43763 284 aaPredicted RBP11.36□□□□□ -0.59
ERCC3-209ENST00000494464 CD5LO43866 347 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 GPRIN2O60269 458 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 LY6HO94772 140 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 SLC2A10O95528 541 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 PTHP01270 115 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 PATE4P0C8F1 98 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 PSMB9P28065 219 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 C21orf33P30042 268 aaPredicted RBP11.36□□□□□ -0.59
ERCC3-209ENST00000494464 PDLIM4P50479 330 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 FXYD6P3P58550 94 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 CTXN1P60606 82 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 RAP1BP61224 184 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 RAP1AP62834 184 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 SLC25A47Q6Q0C1 308 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 SLC16A14Q7RTX9 510 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 OR13C2Q8NGS9 318 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 NABP1Q96AH0 204 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 ZNF582Q96NG8 517 aaPredicted RBP11.36□□□□□ -0.59
ERCC3-209ENST00000494464 TSPAN32Q96QS1 320 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 VRK1Q99986 396 aaPredicted RBP11.36□□□□□ -0.59
ERCC3-209ENST00000494464 FUNDC2Q9BWH2 189 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 RAB1BQ9H0U4 201 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 FN3KQ9H479 309 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 SIAEQ9HAT2 523 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 AMBNQ9NP70 447 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 SIGLEC7Q9Y286 467 aa11.36□□□□□ -0.59
ERCC3-209ENST00000494464 CHD3Q12873 2000 aaKnown RBP11.36□□□□□ -0.59
ERCC3-209ENST00000494464 IGKV1D-43A0A0B4J1Z2 117 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 LOC390937A0A1W2PQ73 354 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 SLC22A23A1A5C7 686 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 VWC2LB2RUY7 222 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 BHLHE40O14503 412 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 PTP4A3O75365 173 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 ERCC1P07992 297 aaPredicted RBP11.35□□□□□ -0.59
ERCC3-209ENST00000494464 MMP7P09237 267 aaPredicted RBP11.35□□□□□ -0.59
ERCC3-209ENST00000494464 PCSK6P29122 969 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 FMODQ06828 376 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 MSMPQ1L6U9 139 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 TMEM249Q2WGJ8 235 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 CLEC12AQ5QGZ9 265 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 THEM4Q5T1C6 240 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 SMARCD3Q6STE5 483 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 SLC16A12Q6ZSM3 486 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 FOXL2NBQ6ZUU3 175 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 LNX2Q8N448 690 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 SLC30A7Q8NEW0 376 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 OR51A7Q8NH64 312 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 NEU4Q8WWR8 484 aaPredicted RBP11.35□□□□□ -0.59
ERCC3-209ENST00000494464 RFKQ969G6 155 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 TMEM80Q96HE8 168 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 PLEKHA8Q96JA3 519 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 SAMD8Q96LT4 415 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 TNFRSF13CQ96RJ3 184 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 PIMREGQ9BSJ6 248 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 MRPL37Q9BZE1 423 aaKnown RBP11.35□□□□□ -0.59
ERCC3-209ENST00000494464 NDEL1Q9GZM8 345 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 NAA50Q9GZZ1 169 aaKnown RBP11.35□□□□□ -0.59
ERCC3-209ENST00000494464 DYNLRB1Q9NP97 96 aa11.35□□□□□ -0.59
ERCC3-209ENST00000494464 ZNF346Q9UL40 294 aaKnown RBP11.35□□□□□ -0.59
ERCC3-209ENST00000494464 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.35□□□□□ -0.59
ERCC3-209ENST00000494464 DIMT1Q9UNQ2 313 aaKnown RBP11.35□□□□□ -0.59
ERCC3-209ENST00000494464 M0R233 179 aa11.34□□□□□ -0.59
ERCC3-209ENST00000494464 SYNGR3O43761 229 aa11.34□□□□□ -0.59
ERCC3-209ENST00000494464 LCKP06239 509 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms