RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 CAMTA1Q9Y6Y1 1673 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 ANKRD12Q6UB98 2062 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 SDK2Q58EX2 2172 aa1.82□□□□□ -2.12
ITGB1-216ENST00000493758 TMEM120BA0PK00 339 aa1.81□□□□□ -2.12
ITGB1-216ENST00000493758 ARHGEF35A5YM69 484 aa1.81□□□□□ -2.12
ITGB1-216ENST00000493758 BTNL10A8MVZ5 291 aa1.81□□□□□ -2.12
ITGB1-216ENST00000493758 H6PDO95479 791 aa1.81□□□□□ -2.12
ITGB1-216ENST00000493758 LHBP01229 141 aa1.81□□□□□ -2.12
ITGB1-216ENST00000493758 IGLV3-25P01717 112 aa1.81□□□□□ -2.12
ITGB1-216ENST00000493758 HLA-DQB1P01920 261 aa1.81□□□□□ -2.12
ITGB1-216ENST00000493758 PSMB5P28074 263 aa1.81□□□□□ -2.12
ITGB1-216ENST00000493758 LOXP28300 417 aaPredicted RBP1.81□□□□□ -2.12
ITGB1-216ENST00000493758 BST1Q10588 318 aa1.81□□□□□ -2.12
ITGB1-216ENST00000493758 FUT5Q11128 374 aa1.81□□□□□ -2.12
ITGB1-216ENST00000493758 SOHLH1Q5JUK2 328 aa1.81□□□□□ -2.12
ITGB1-216ENST00000493758 TEX30Q5JUR7 227 aa1.81□□□□□ -2.12
ITGB1-216ENST00000493758 SPIN3Q5JUX0 258 aa1.81□□□□□ -2.12
ITGB1-216ENST00000493758 TMEM107Q6UX40 140 aa1.81□□□□□ -2.12
ITGB1-216ENST00000493758 CASP12Q6UXS9 341 aa1.81□□□□□ -2.12
ITGB1-216ENST00000493758 TTLQ8NG68 377 aa1.81□□□□□ -2.12
ITGB1-216ENST00000493758 RAB3IL1Q8TBN0 382 aa1.81□□□□□ -2.12
ITGB1-216ENST00000493758 TVP23CQ96ET8 276 aa1.81□□□□□ -2.12
ITGB1-216ENST00000493758 DNAJC1Q96KC8 554 aaKnown RBP1.81□□□□□ -2.12
ITGB1-216ENST00000493758 CDX2Q99626 313 aaPredicted RBP1.81□□□□□ -2.12
ITGB1-216ENST00000493758 ANKRD60Q9BZ19 345 aa1.81□□□□□ -2.12
ITGB1-216ENST00000493758 NEK6Q9HC98 313 aa1.81□□□□□ -2.12
ITGB1-216ENST00000493758 SAMSN1Q9NSI8 373 aaKnown RBP1.81□□□□□ -2.12
ITGB1-216ENST00000493758 ZNF391Q9UJN7 358 aa1.81□□□□□ -2.12
ITGB1-216ENST00000493758 IGHV1-3A0A0C4DH29 117 aa1.8□□□□□ -2.12
ITGB1-216ENST00000493758 A0A1B0GUH1 482 aa1.8□□□□□ -2.12
ITGB1-216ENST00000493758 C5orf63A6NC05 138 aa1.8□□□□□ -2.12
ITGB1-216ENST00000493758 KRBOX1C9JBD0 128 aa1.8□□□□□ -2.12
ITGB1-216ENST00000493758 GLSO94925 669 aaPredicted RBP1.8□□□□□ -2.12
ITGB1-216ENST00000493758 SERPINA5P05154 406 aa1.8□□□□□ -2.12
ITGB1-216ENST00000493758 NAA10P41227 235 aaPredicted RBP1.8□□□□□ -2.12
ITGB1-216ENST00000493758 TMED10P49755 219 aaKnown RBP1.8□□□□□ -2.12
ITGB1-216ENST00000493758 PGGHGQ32M88 737 aa1.8□□□□□ -2.12
ITGB1-216ENST00000493758 NT5DC3Q86UY8 548 aa1.8□□□□□ -2.12
ITGB1-216ENST00000493758 CDR2LQ86X02 465 aaPredicted RBP1.8□□□□□ -2.12
ITGB1-216ENST00000493758 NBPF5PQ86XG9 351 aaPredicted RBP1.8□□□□□ -2.12
ITGB1-216ENST00000493758 IQCKQ8N0W5 287 aa1.8□□□□□ -2.12
ITGB1-216ENST00000493758 TMEM104Q8NE00 496 aa1.8□□□□□ -2.12
ITGB1-216ENST00000493758 OR5M1Q8NGP8 315 aa1.8□□□□□ -2.12
ITGB1-216ENST00000493758 OR13C2Q8NGS9 318 aa1.8□□□□□ -2.12
ITGB1-216ENST00000493758 OR1P1Q8NH06 330 aa1.8□□□□□ -2.12
ITGB1-216ENST00000493758 OR10G6Q8NH81 332 aa1.8□□□□□ -2.12
ITGB1-216ENST00000493758 TMEM230Q96A57 120 aa1.8□□□□□ -2.12
ITGB1-216ENST00000493758 RBBP8Q99708 897 aa1.8□□□□□ -2.12
ITGB1-216ENST00000493758 UBIAD1Q9Y5Z9 338 aa1.8□□□□□ -2.12
ITGB1-216ENST00000493758 USP47Q96K76 1375 aa1.8□□□□□ -2.12
ITGB1-216ENST00000493758 TRAV19A0A0A6YYK7 116 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 PDZK1P1A8MUH7 402 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 K7EMT4 169 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 RAB29O14966 203 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 FKBP6O75344 327 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 CYB5R3P00387 301 aaPredicted RBP1.79□□□□□ -2.12
ITGB1-216ENST00000493758 HNRNPH3P31942 346 aaKnown RBP1.79□□□□□ -2.12
ITGB1-216ENST00000493758 TNFSF9P41273 254 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 PRLHRP49683 370 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 GDI2P50395 445 aaKnown RBP1.79□□□□□ -2.12
ITGB1-216ENST00000493758 ACLYP53396 1101 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 PPIDQ08752 370 aaKnown RBP1.79□□□□□ -2.12
ITGB1-216ENST00000493758 SSX2Q16385 188 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 SNRNP35Q16560 246 aaKnown RBP1.79□□□□□ -2.12
ITGB1-216ENST00000493758 RGS9BPQ6ZS82 235 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 UBE2J2Q8N2K1 259 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 ZNF664Q8N3J9 261 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 ZFP41Q8N8Y5 198 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 PRELID2Q8N945 189 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 NECAB1Q8N987 351 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 CHST4Q8NCG5 386 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 OR9K2Q8NGE7 335 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 TM2D3Q9BRN9 247 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 GGTLC1Q9BX51 225 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 NEUROG2Q9H2A3 272 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 OR51M1Q9H341 326 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 SLC2A8Q9NY64 477 aa1.79□□□□□ -2.12
ITGB1-216ENST00000493758 LTBP4Q8N2S1 1624 aa1.78□□□□□ -2.12
ITGB1-216ENST00000493758 IGHV3-49A0A0A0MS15 119 aa1.78□□□□□ -2.12
ITGB1-216ENST00000493758 A0A1B0GW55 424 aa1.78□□□□□ -2.12
ITGB1-216ENST00000493758 A6NDN8 102 aa1.78□□□□□ -2.12
ITGB1-216ENST00000493758 L7N2F9 121 aa1.78□□□□□ -2.12
ITGB1-216ENST00000493758 SCAMP2O15127 329 aaKnown RBP1.78□□□□□ -2.12
ITGB1-216ENST00000493758 PAHP00439 452 aa1.78□□□□□ -2.12
ITGB1-216ENST00000493758 SERPINE2P07093 398 aa1.78□□□□□ -2.12
ITGB1-216ENST00000493758 DUX4L2P0CJ85 424 aa1.78□□□□□ -2.12
ITGB1-216ENST00000493758 DUX4L3P0CJ86 424 aa1.78□□□□□ -2.12
ITGB1-216ENST00000493758 DUX4L5P0CJ88 424 aa1.78□□□□□ -2.12
ITGB1-216ENST00000493758 DUX4L6P0CJ89 424 aa1.78□□□□□ -2.12
ITGB1-216ENST00000493758 DUX4L7P0CJ90 424 aa1.78□□□□□ -2.12
ITGB1-216ENST00000493758 NCF2P19878 526 aaPredicted RBP1.78□□□□□ -2.12
ITGB1-216ENST00000493758 U2AF2P26368 475 aaKnown RBP eCLIP1.78□□□□□ -2.12
ITGB1-216ENST00000493758 TGFBR1P36897 503 aa1.78□□□□□ -2.12
ITGB1-216ENST00000493758 CDKN2DP55273 166 aa1.78□□□□□ -2.12
ITGB1-216ENST00000493758 RPS11P62280 158 aaKnown RBP eCLIP1.78□□□□□ -2.12
ITGB1-216ENST00000493758 RCAN2Q14206 197 aa1.78□□□□□ -2.12
ITGB1-216ENST00000493758 GPR107Q5VW38 600 aa1.78□□□□□ -2.12
ITGB1-216ENST00000493758 RNASEKQ6P5S7 137 aaKnown RBP1.78□□□□□ -2.12
ITGB1-216ENST00000493758 NPSR1Q6W5P4 371 aa1.78□□□□□ -2.12
ITGB1-216ENST00000493758 TBC1D21Q8IYX1 336 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms