RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 PRAMEF27A3QJZ7 478 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 PRAMEF25A6NGN4 478 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 PRAMEF4O60810 478 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 HLA-DQB2P05538 268 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 AKAIN1P0CW23 69 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 CD37P11049 281 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 CEACAM1P13688 526 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 MMP11P24347 488 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 FPR2P25090 351 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 OR10J1P30954 320 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 MC5RP33032 325 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 ADRA1AP35348 466 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 SLC6A11P48066 632 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 MNX1P50219 401 aaPredicted RBP6.21□□□□□ -1.42
VPS13B-205ENST00000493587 PRPS1P60891 318 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 SNRPNP63162 240 aaKnown RBP6.21□□□□□ -1.42
VPS13B-205ENST00000493587 MTAPQ13126 283 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 TAF9Q16594 264 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 FBLN7Q53RD9 439 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 LY6G6FQ5SQ64 297 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 CPTPQ5TA50 214 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 PRAMEF9Q5VWM5 478 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 ANKRD33Q7Z3H0 272 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 VRK2Q86Y07 508 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 OR11L1Q8NGX0 322 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 ABHD5Q8WTS1 349 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 FAM3CQ92520 227 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 SLC25A38Q96DW6 304 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 HMCESQ96FZ2 354 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 APIPQ96GX9 242 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 ZCCHC3Q9NUD5 404 aaKnown RBP6.21□□□□□ -1.42
VPS13B-205ENST00000493587 SLC7A7Q9UM01 511 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 CCL27Q9Y4X3 112 aa6.21□□□□□ -1.42
VPS13B-205ENST00000493587 A0A0A6YYH2 397 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 A6NJ64 397 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 CTDSPLO15194 276 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 GRM6O15303 877 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 IGLV3-27P01718 113 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 UMODP07911 640 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 FCGR3AP08637 254 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 MSR1P21757 451 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 CDK2P24941 298 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 ELLP55199 621 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-205ENST00000493587 TAS2R19P59542 299 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 ADAM8P78325 824 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 DUSP8Q13202 625 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 MMDQ15546 238 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 TPTE2P1Q5T6R2 138 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 AADACL3Q5VUY0 350 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 SAMD13Q5VXD3 122 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 EID2Q8N6I1 236 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 STXBP6Q8NFX7 210 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 OR4K5Q8NGD3 323 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 OR13D1Q8NGV5 346 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 OR4K15Q8NH41 348 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 IL22RA2Q969J5 263 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 MOAP1Q96BY2 351 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 ZNF48Q96MX3 618 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-205ENST00000493587 SLC22A12Q96S37 553 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 GINS3Q9BRX5 216 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 CST9LQ9H4G1 147 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 PLSCR2Q9NRY7 297 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 SLC2A8Q9NY64 477 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 NUDT4Q9NZJ9 180 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 ABT1Q9ULW3 272 aaKnown RBP6.2□□□□□ -1.42
VPS13B-205ENST00000493587 MRPS33Q9Y291 106 aaKnown RBP6.2□□□□□ -1.42
VPS13B-205ENST00000493587 ATG4BQ9Y4P1 393 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 ARL5AQ9Y689 179 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 SIRT4Q9Y6E7 314 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-205ENST00000493587 PLXND1Q9Y4D7 1925 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 CHD7Q9P2D1 2997 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 ELOA3DA6NLF2 546 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-205ENST00000493587 RAB29O14966 203 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 FAM157CP0CG43 387 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 PTNP21246 168 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 GLRA1P23415 457 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 SNCAP37840 140 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 SLC11A1P49279 550 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 EFNA3P52797 238 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 RGS8P57771 180 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-205ENST00000493587 SMIM11AP58511 58 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 IL13RA1P78552 427 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 HSF1Q00613 529 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 ACSM2AQ08AH3 577 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 DHRS2Q13268 280 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 TUSC3Q13454 348 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 EIF2B1Q14232 305 aaKnown RBP6.2□□□□□ -1.42
VPS13B-205ENST00000493587 ELOBQ15370 118 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 SMIM21Q3B7S5 101 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 KRTCAP3Q53RY4 240 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 ACSM2BQ68CK6 577 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 RPL7L1Q6DKI1 246 aaKnown RBP6.2□□□□□ -1.42
VPS13B-205ENST00000493587 ZNF66Q6ZN08 573 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 FAM219AQ8IW50 185 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 OR6N1Q8NGY5 312 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 CD200R1Q8TD46 325 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 CAPNS2Q96L46 248 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 MIEN1Q9BRT3 115 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 VAMP8Q9BV40 100 aa6.2□□□□□ -1.42
VPS13B-205ENST00000493587 CAPN10Q9HC96 672 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms