RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161		A0A1B0GUS0	222 aa		11.39	□□□□□ -0.59
SAMM50-204	ENST00000493161	CLPSL1	A2RUU4	121 aa		11.39	□□□□□ -0.59
SAMM50-204	ENST00000493161	OR6C6	A6NF89	314 aa		11.39	□□□□□ -0.59
SAMM50-204	ENST00000493161	NDUFA7	O95182	113 aa		11.39	□□□□□ -0.59
SAMM50-204	ENST00000493161	HLA-DPB1	P04440	258 aa		11.39	□□□□□ -0.59
SAMM50-204	ENST00000493161	CRYBA1	P05813	215 aa		11.39	□□□□□ -0.59
SAMM50-204	ENST00000493161	VIM	P08670	466 aa	Known RBP	11.39	□□□□□ -0.59
SAMM50-204	ENST00000493161	ZNF362	Q5T0B9	420 aa	Predicted RBP	11.39	□□□□□ -0.59
SAMM50-204	ENST00000493161	FAM205BP	Q63HN1	556 aa		11.39	□□□□□ -0.59
SAMM50-204	ENST00000493161	WDR25	Q64LD2	544 aa	Predicted RBP	11.39	□□□□□ -0.59
SAMM50-204	ENST00000493161	FBXW12	Q6X9E4	464 aa		11.39	□□□□□ -0.59
SAMM50-204	ENST00000493161	BHLHE23	Q8NDY6	225 aa		11.39	□□□□□ -0.59
SAMM50-204	ENST00000493161	OR8B3	Q8NGG8	313 aa		11.39	□□□□□ -0.59
SAMM50-204	ENST00000493161	OR1F12	Q8NHA8	337 aa		11.39	□□□□□ -0.59
SAMM50-204	ENST00000493161	PLEKHA8	Q96JA3	519 aa		11.39	□□□□□ -0.59
SAMM50-204	ENST00000493161		Q96M85	177 aa		11.39	□□□□□ -0.59
SAMM50-204	ENST00000493161	OR8B2	Q96RD0	313 aa		11.39	□□□□□ -0.59
SAMM50-204	ENST00000493161	PCGF1	Q9BSM1	259 aa		11.39	□□□□□ -0.59
SAMM50-204	ENST00000493161	WDR76	Q9H967	626 aa		11.39	□□□□□ -0.59
SAMM50-204	ENST00000493161	ASH2L	Q9UBL3	628 aa		11.39	□□□□□ -0.59
SAMM50-204	ENST00000493161	SNX13	Q9Y5W8	968 aa		11.39	□□□□□ -0.59
SAMM50-204	ENST00000493161	EFCAB9	A8MZ26	197 aa		11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161		J3KTA2	159 aa		11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	IFNL4	K9M1U5	179 aa		11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161		M0QZ24	198 aa		11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	FXYD1	O00168	92 aa		11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	CDC42EP2	O14613	210 aa		11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	RER1	O15258	196 aa		11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	CPT2	P23786	658 aa		11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	SRP9	P49458	86 aa	Known RBP	11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	ST3GAL3	Q11203	375 aa		11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	CYBRD1	Q53TN4	286 aa		11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	GPR157	Q5UAW9	335 aa		11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	TBPL2	Q6SJ96	375 aa		11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	OAF	Q86UD1	273 aa		11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	OR13G1	Q8NGZ3	307 aa		11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	TPD52L3	Q96J77	140 aa		11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	ZNF583	Q96ND8	569 aa		11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	ZNF582	Q96NG8	517 aa	Predicted RBP	11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	TBX15	Q96SF7	602 aa		11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	SLC30A2	Q9BRI3	323 aa		11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	WAC	Q9BTA9	647 aa		11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	NOX4	Q9NPH5	578 aa		11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	CLN8	Q9UBY8	286 aa		11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	COA3	Q9Y2R0	106 aa	Predicted RBP	11.38	□□□□□ -0.59
SAMM50-204	ENST00000493161	TEX13C	A0A0J9YWL9	993 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	CENPVL3	A0A0U1RRI6	287 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	FFAR1	O14842	300 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	TSPAN15	O95858	294 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	CFHR2	P36980	270 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	GPR4	P46093	362 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	SLC9A3	P48764	834 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	PRKCD	Q05655	676 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	DBP	Q10586	325 aa	Predicted RBP	11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	MAB21L1	Q13394	359 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	AQP6	Q13520	282 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	ZNF181	Q2M3W8	571 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	LRRC23	Q53EV4	343 aa	Predicted RBP	11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	NLRC3	Q7RTR2	1065 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	FAM122B	Q7Z309	247 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	PCYOX1L	Q8NBM8	494 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	LINC01006	Q8NI28	216 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	TSPEAR	Q8WU66	669 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	RASD2	Q96D21	266 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	PRRC1	Q96M27	445 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	COG8	Q96MW5	612 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	ECSIT	Q9BQ95	431 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	RERGL	Q9H628	205 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	GRHPR	Q9UBQ7	328 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	CTSZ	Q9UBR2	303 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	TMCC3	Q9ULS5	477 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	RNF114	Q9Y508	228 aa		11.37	□□□□□ -0.59
SAMM50-204	ENST00000493161	PRSS37	A4D1T9	235 aa		11.36	□□□□□ -0.59
SAMM50-204	ENST00000493161	LRRC30	A6NM36	301 aa		11.36	□□□□□ -0.59
SAMM50-204	ENST00000493161	TNFRSF13B	O14836	293 aa	Predicted RBP	11.36	□□□□□ -0.59
SAMM50-204	ENST00000493161	TIMM23	O14925	209 aa		11.36	□□□□□ -0.59
SAMM50-204	ENST00000493161	SLC16A7	O60669	478 aa		11.36	□□□□□ -0.59
SAMM50-204	ENST00000493161	IGHV4-59	P01825	116 aa		11.36	□□□□□ -0.59
SAMM50-204	ENST00000493161	CD14	P08571	375 aa		11.36	□□□□□ -0.59
SAMM50-204	ENST00000493161	MMP9	P14780	707 aa		11.36	□□□□□ -0.59
SAMM50-204	ENST00000493161	KDELR2	P33947	212 aa		11.36	□□□□□ -0.59
SAMM50-204	ENST00000493161	RPL4	P36578	427 aa	Known RBP	11.36	□□□□□ -0.59
SAMM50-204	ENST00000493161	PSMB10	P40306	273 aa		11.36	□□□□□ -0.59
SAMM50-204	ENST00000493161	CYLC2	Q14093	348 aa	Predicted RBP	11.36	□□□□□ -0.59
SAMM50-204	ENST00000493161	RSPO1	Q2MKA7	263 aa	Predicted RBP	11.36	□□□□□ -0.59
SAMM50-204	ENST00000493161	CLEC12A	Q5QGZ9	265 aa		11.36	□□□□□ -0.59
SAMM50-204	ENST00000493161	PRAMEF6	Q5VXH4	476 aa		11.36	□□□□□ -0.59
SAMM50-204	ENST00000493161	ZNF620	Q6ZNG0	422 aa		11.36	□□□□□ -0.59
SAMM50-204	ENST00000493161	DCDC5	Q6ZRR9	648 aa		11.36	□□□□□ -0.59
SAMM50-204	ENST00000493161	MAGEB18	Q96M61	343 aa		11.36	□□□□□ -0.59
SAMM50-204	ENST00000493161	SYT4	Q9H2B2	425 aa		11.36	□□□□□ -0.59
SAMM50-204	ENST00000493161	GMPR2	Q9P2T1	348 aa	Known RBP	11.36	□□□□□ -0.59
SAMM50-204	ENST00000493161		A0A087WUU8	490 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161		A0A1B0GWJ7	208 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	IQCF6	A8MYZ5	107 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	XKRY	O14609	159 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	PHYH	O14832	338 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	ENSA	O43768	121 aa	Known RBP	11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	GPR137B	O60478	399 aa		11.35	□□□□□ -0.59
SAMM50-204	ENST00000493161	FAM20B	O75063	409 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms