RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 RPL21P46778 160 aaKnown RBP3.7□□□□□ -1.82
BRCA1-220ENST00000492859 RORCP51449 518 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 PCBP3P57721 371 aaKnown RBP3.7□□□□□ -1.82
BRCA1-220ENST00000492859 TAS2R31P59538 309 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 PPP3R1P63098 170 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 ECH1Q13011 328 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 GAGE5Q13069 117 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 GAGE6Q13070 117 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 GAB1Q13480 694 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 SPHARQ15513 63 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 TAF9Q16594 264 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 PRSS8Q16651 343 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 UPP1Q16831 310 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 LRRC75BQ2VPJ9 315 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 TRMT5Q32P41 509 aaKnown RBP3.7□□□□□ -1.82
BRCA1-220ENST00000492859 PARP15Q460N3 678 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 ACSF3Q4G176 576 aaPredicted RBP3.7□□□□□ -1.82
BRCA1-220ENST00000492859 CT45A2Q5DJT8 189 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 NCMAPQ5T1S8 102 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 FAM102AQ5T9C2 384 aaPredicted RBP3.7□□□□□ -1.82
BRCA1-220ENST00000492859 NANOGP8Q6NSW7 305 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 CDC42EP5Q6NZY7 148 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 ZNF620Q6ZNG0 422 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 CLNKQ7Z7G1 428 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 CATSPER3Q86XQ3 398 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 BAP18Q8IXM2 172 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 CFAP52Q8N1V2 620 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 FITM2Q8N6M3 262 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 IQCF1Q8N6M8 205 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 SLC16A11Q8NCK7 471 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 ADAD2Q8NCV1 583 aaKnown RBP3.7□□□□□ -1.82
BRCA1-220ENST00000492859 OR1B1Q8NGR6 318 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 OR13C4Q8NGS5 318 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 OR4C6Q8NH72 309 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 SPPL2BQ8TCT7 592 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 GATAD1Q8WUU5 269 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 TRUB1Q8WWH5 349 aaKnown RBP3.7□□□□□ -1.82
BRCA1-220ENST00000492859 SNAPC3Q92966 411 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 RPUSD4Q96CM3 377 aaKnown RBP3.7□□□□□ -1.82
BRCA1-220ENST00000492859 MRAP2Q96G30 205 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 URM1Q9BTM9 101 aaKnown RBP3.7□□□□□ -1.82
BRCA1-220ENST00000492859 SDCBP2Q9H190 292 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 C5orf66Q9H5L9 145 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 HINT3Q9NQE9 182 aaKnown RBP3.7□□□□□ -1.82
BRCA1-220ENST00000492859 DLL3Q9NYJ7 618 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 CALML5Q9NZT1 146 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 OR1A1Q9P1Q5 309 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 METTL1Q9UBP6 276 aaKnown RBP3.7□□□□□ -1.82
BRCA1-220ENST00000492859 PRODH2Q9UF12 536 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 ZFP30Q9Y2G7 519 aa3.7□□□□□ -1.82
BRCA1-220ENST00000492859 PRDM15P57071 1507 aaPredicted RBP3.7□□□□□ -1.82
BRCA1-220ENST00000492859 TMEM2Q9UHN6 1383 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 TRAV18A0A075B6X5 111 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 A0A0A0MQY5 61 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 TRBV4-1A0A0J9YWV2 114 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 A0A1B0GU03 582 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 CXorf65A6NEN9 183 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 FAM159BA6NKW6 160 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 J3QR06 171 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 KIR2DS3K7RE56 304 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 FOXN1O15353 648 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 TAPBPO15533 448 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 P2RX6O15547 441 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 PHF1O43189 567 aaPredicted RBP3.69□□□□□ -1.82
BRCA1-220ENST00000492859 SOX15O60248 233 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 FOXH1O75593 365 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 TRAPPC6AO75865 159 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 GADD45GO95257 159 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 EML2O95834 649 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 C6orf47O95873 294 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 ESR1P03372 595 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 EDN1P05305 212 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 UMODP07911 640 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 GYPEP15421 78 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 ARSBP15848 533 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 PVALBP20472 110 aaPredicted RBP3.69□□□□□ -1.82
BRCA1-220ENST00000492859 CYP7A1P22680 504 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 CBLP22681 906 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 HRH2P25021 359 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 DUTP33316 252 aaKnown RBP3.69□□□□□ -1.82
BRCA1-220ENST00000492859 GGT2P36268 569 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 LEPP41159 167 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 SULT1A1P50225 295 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 SULT1A2P50226 295 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 FOXG1P55316 489 aaPredicted RBP3.69□□□□□ -1.82
BRCA1-220ENST00000492859 CLDN6P56747 220 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 CLRN1P58418 232 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 TPI1P60174 286 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 ERVFRD-1P60508 538 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 CDK5Q00535 292 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 ID2Q02363 134 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 UBE2V1Q13404 147 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 ZNF234Q14588 700 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 KIR2DS3Q14952 304 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 RSU1Q15404 277 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 NEDD8Q15843 81 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 SRSF7Q16629 238 aaKnown RBP eCLIP3.69□□□□□ -1.82
BRCA1-220ENST00000492859 TMEM97Q5BJF2 176 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 TFDP3Q5H9I0 405 aa3.69□□□□□ -1.82
BRCA1-220ENST00000492859 CST9Q5W186 159 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms