RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 PRICKLE3O43900 615 aaPredicted RBP12.92□□□□□ -0.34
ARHGEF39-205ENST00000490638 Q6ZTK2 550 aa12.92□□□□□ -0.34
ARHGEF39-205ENST00000490638 TMEM185AQ8NFB2 350 aa12.92□□□□□ -0.34
ARHGEF39-205ENST00000490638 KCTD12Q96CX2 325 aaKnown RBP12.92□□□□□ -0.34
ARHGEF39-205ENST00000490638 SCNM1Q9BWG6 230 aa12.92□□□□□ -0.34
ARHGEF39-205ENST00000490638 PTTG3PQ9NZH4 202 aa12.92□□□□□ -0.34
ARHGEF39-205ENST00000490638 AQP6Q13520 282 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 DESI1Q6ICB0 168 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 C1orf87Q8N0U7 546 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 FAM83FQ8NEG4 500 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 MYO7BQ6PIF6 2116 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 YES1P07947 543 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 OPRL1P41146 370 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 SLC17A1Q14916 467 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 ZNF181Q2M3W8 571 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 ATP1A1-AS1Q5TC04 95 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 CFAP77Q6ZQR2 320 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 GTPBP8Q8N3Z3 284 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 NANOGP1Q8N7R0 232 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 LGALS14Q8TCE9 139 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 OPALINQ96PE5 141 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 MBOAT4Q96T53 435 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 TBCCD1Q9NVR7 557 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 EHFQ9NZC4 300 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 LIFP15018 202 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 SRMP19623 302 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 SFXN4Q6P4A7 337 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 MEX3BQ6ZN04 569 aaKnown RBP12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 DGAT2L6Q6ZPD8 337 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 CCDC36Q8IYA8 594 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 SYS1Q8N2H4 156 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 FAM3DQ96BQ1 224 aa12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 THAP7Q9BT49 309 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF39-205ENST00000490638 IMPA2O14732 288 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 NRASP01111 189 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 CSF1P09603 554 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 TNFSF8P32971 234 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 SPSB2Q99619 263 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 CCDC32Q9BV29 185 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 NTN4Q9HB63 628 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 TRDV1A0A1B0GX56 115 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 ZNF701M0R085 212 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 CSRP1P21291 193 aaKnown RBP12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 SIAEQ9HAT2 523 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 C12orf10Q9HB07 376 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 STEAP1Q9UHE8 339 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 GREB1Q4ZG55 1949 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 ZFC3H1O60293 1989 aaKnown RBP12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 LYRM1O43325 122 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 SULT1C4O75897 302 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 PET100P0DJ07 73 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 APEHP13798 732 aaKnown RBP12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 LIPAP38571 399 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 ZMYND11Q15326 602 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 SYT9Q86SS6 491 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 ZNF695Q8IW36 515 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 SULF2Q8IWU5 870 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 OR51F2Q8NH61 342 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 EXTL1Q92935 676 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 TRAPPC4Q9Y296 219 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 GMEB1Q9Y692 573 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 PKDREJQ9NTG1 2253 aa12.9□□□□□ -0.34
ARHGEF39-205ENST00000490638 TOXO94900 526 aa12.9□□□□□ -0.35
ARHGEF39-205ENST00000490638 AKAIN1P0CW23 69 aa12.9□□□□□ -0.35
ARHGEF39-205ENST00000490638 MTNR1BP49286 362 aa12.9□□□□□ -0.35
ARHGEF39-205ENST00000490638 EGR3Q06889 387 aa12.9□□□□□ -0.35
ARHGEF39-205ENST00000490638 CTU2Q2VPK5 515 aaKnown RBP12.9□□□□□ -0.35
ARHGEF39-205ENST00000490638 DMRTC1Q5HYR2 192 aa12.9□□□□□ -0.35
ARHGEF39-205ENST00000490638 TMEM108Q6UXF1 575 aa12.9□□□□□ -0.35
ARHGEF39-205ENST00000490638 ZCCHC14Q8WYQ9 949 aaKnown RBP12.9□□□□□ -0.35
ARHGEF39-205ENST00000490638 APOBEC3DQ96AK3 386 aaPredicted RBP12.9□□□□□ -0.35
ARHGEF39-205ENST00000490638 BANF2Q9H503 90 aa12.9□□□□□ -0.35
ARHGEF39-205ENST00000490638 FOXJ2Q9P0K8 574 aa12.9□□□□□ -0.35
ARHGEF39-205ENST00000490638 MGAMO43451 1857 aa12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 SMCO3A2RU48 225 aa12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 ZSCAN5BA6NJL1 495 aa12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 MASP2O00187 686 aa12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 UBL3O95164 117 aa12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 UBBP0CG47 229 aa12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 KIR2DL3P43628 341 aa12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 ZNF121P58317 390 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 ZXDCQ2QGD7 858 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 EIF2S3LQ2VIR3 472 aaKnown RBP12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 HAGHLQ6PII5 290 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 PHC2Q8IXK0 858 aa12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 CENPSQ8N2Z9 138 aa12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 OR4Q3Q8NH05 313 aa12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 OR1F12Q8NHA8 337 aa12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 NELFAQ9H3P2 528 aa12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 FKBP14Q9NWM8 211 aa12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 SLCO1C1Q9NYB5 712 aa12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 MGAT4CQ9UBM8 478 aa12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 CCL21O00585 134 aa12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 DEGS1O15121 323 aa12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 PIPP12273 146 aaPredicted RBP12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 ZNF32P17041 273 aa12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 NFYBP25208 207 aa12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 PMP22Q01453 160 aa12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 PCK2Q16822 640 aa12.89□□□□□ -0.35
ARHGEF39-205ENST00000490638 CCDC58Q4VC31 144 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms