RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 PPP1R2P3Q6NXS1 205 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 SLC25A48Q6ZT89 311 aaKnown RBP3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 ASCL5Q7RTU5 278 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 OR2W3Q7Z3T1 314 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 SETD3Q86TU7 594 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 LIX1Q8N485 282 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 PNKDQ8N490 385 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 ARIH2OSQ8N7S6 290 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 Q8N9W7 124 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 OR56A4Q8NGH8 313 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 OR51S1Q8NGJ8 323 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 BLOC1S5Q8TDH9 187 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 CHCHD10Q8WYQ3 142 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 TFGQ92734 400 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 UFD1Q92890 307 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 CCDC127Q96BQ5 260 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 ZFP3Q96NJ6 502 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 KCNA7Q96RP8 456 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 RASL11BQ9BPW5 248 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 DCUN1D5Q9BTE7 237 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 C9orf16Q9BUW7 83 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 DEFB129Q9H1M3 183 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 SYT4Q9H2B2 425 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 RBKSQ9H477 322 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 NXF3Q9H4D5 531 aaKnown RBP3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 NTN4Q9HB63 628 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 RETNQ9HD89 108 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 FGF20Q9NP95 211 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 SLC39A1Q9NY26 324 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 LSM7Q9UK45 103 aaKnown RBP3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 NXT1Q9UKK6 140 aaKnown RBP3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 ADGRA3Q8IWK6 1321 aa3.18□□□□□ -1.9
HMGB1P38-201ENST00000490557 TMEM213A2RRL7 107 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 A6NIZ1 184 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 SLC22A20A6NK97 555 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 OR5B21A6NL26 309 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 IDSB3KWA1 339 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 KLRC4-KLRK1H3BQV0 150 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 GFYI3L273 518 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 HSD17B6O14756 317 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 TOX3O15405 576 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 UGT1A9O60656 530 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 ZMPSTE24O75844 475 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 RBBP9O75884 186 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 PLEKHA8P1O95397 391 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 CD160O95971 181 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 PET100P0DJ07 73 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 COX5AP20674 150 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 CALCRP30988 508 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 ARR3P36575 388 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 KLK7P49862 253 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 CRISP1P54107 249 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 RAP1BP61224 184 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 ATP6V0D1P61421 351 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 RPS15AP62244 130 aaKnown RBP3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 VSNL1P62760 191 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 PITPNAQ00169 270 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 TGFBR3Q03167 851 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 MADCAM1Q13477 382 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 SNCBQ16143 134 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 GABRA6Q16445 453 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 RPEL1Q2QD12 228 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 KHDRBS2Q5VWX1 349 aaKnown RBP3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 C11orf71Q6IPW1 123 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 CLEC18BQ6UXF7 455 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 PGAP1Q75T13 922 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 SSX6Q7RTT6 188 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 CMC1Q7Z7K0 106 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 BOD1L2Q8IYS8 172 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 ZNF433Q8N7K0 673 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 CCDC112Q8NEF3 446 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 NOXO1Q8NFA2 376 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 SLC7A13Q8TCU3 470 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 RPUSD4Q96CM3 377 aaKnown RBP3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 SELENOSQ9BQE4 189 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 NRIP2Q9BQI9 281 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 UTP23Q9BRU9 249 aaKnown RBP3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 NAA50Q9GZZ1 169 aaKnown RBP3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 WDR55Q9H6Y2 383 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 FOLH1BQ9HBA9 442 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 TREX1Q9NSU2 369 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 IMP3Q9NV31 184 aaKnown RBP3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 USE1Q9NZ43 259 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 KLK12Q9UKR0 248 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 MEGF6O75095 1541 aa3.17□□□□□ -1.9
HMGB1P38-201ENST00000490557 JCADQ9P266 1359 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 PLEKHH1Q9ULM0 1364 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 IGLV3-16A0A075B6K0 115 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 IGHV1OR21-1A0A087WYE8 117 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 TRBV6-6A0A0A6YYG2 114 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 A0A1B0GTI1 187 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 OR6C70A6NIJ9 312 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 CENPBD1B2RD01 187 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 F8VP50 259 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 H3BN98 237 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 H7C0C1 242 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 PLPP1O14494 284 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 RTL8CO15255 209 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 B4GALT5O43286 388 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 TRAF3IP2O43734 574 aaPredicted RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms