RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	ECH1	Q13011	328 aa		9.47	□□□□□ -0.89
GGA1-222	ENST00000489772	CRMP1	Q14194	572 aa		9.47	□□□□□ -0.89
GGA1-222	ENST00000489772	ZMAT1	Q5H9K5	638 aa		9.47	□□□□□ -0.89
GGA1-222	ENST00000489772	HIST2H3PS2	Q5TEC6	136 aa		9.47	□□□□□ -0.89
GGA1-222	ENST00000489772	SLC27A4	Q6P1M0	643 aa		9.47	□□□□□ -0.89
GGA1-222	ENST00000489772	SHQ1	Q6PI26	577 aa	Known RBP	9.47	□□□□□ -0.89
GGA1-222	ENST00000489772	HIST2H3A	Q71DI3	136 aa		9.47	□□□□□ -0.89
GGA1-222	ENST00000489772	LINC00346	Q8IVM7	164 aa		9.47	□□□□□ -0.89
GGA1-222	ENST00000489772	ATG16L2	Q8NAA4	619 aa		9.47	□□□□□ -0.89
GGA1-222	ENST00000489772	OR51L1	Q8NGJ5	315 aa		9.47	□□□□□ -0.89
GGA1-222	ENST00000489772	OR5L1	Q8NGL2	311 aa		9.47	□□□□□ -0.89
GGA1-222	ENST00000489772	NRBF2	Q96F24	287 aa		9.47	□□□□□ -0.89
GGA1-222	ENST00000489772	RBM4	Q9BWF3	364 aa	Known RBP	9.47	□□□□□ -0.89
GGA1-222	ENST00000489772	TEX12	Q9BXU0	123 aa		9.47	□□□□□ -0.89
GGA1-222	ENST00000489772	CMC2	Q9NRP2	79 aa		9.47	□□□□□ -0.89
GGA1-222	ENST00000489772	DECR2	Q9NUI1	292 aa		9.47	□□□□□ -0.89
GGA1-222	ENST00000489772	MRPL22	Q9NWU5	206 aa	Known RBP	9.47	□□□□□ -0.89
GGA1-222	ENST00000489772	NKIRAS2	Q9NYR9	191 aa		9.47	□□□□□ -0.89
GGA1-222	ENST00000489772	IGHV4-61	A0A0C4DH41	118 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	TVP23A	A6NH52	213 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	INAFM1	C9JVW0	142 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	LYNX1	G3V0Z9	82 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	SPRY3	O43610	288 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	TIMM8A	O60220	97 aa	Predicted RBP	9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	TIPRL	O75663	272 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	CIB2	O75838	187 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	LYNX1	P0DP58	116 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	OSM	P13725	252 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	SPI1	P17947	270 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	ACHE	P22303	614 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	PRKACG	P22612	351 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	COL8A2	P25067	703 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	GRK5	P34947	590 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	MMP15	P51511	669 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	BLVRA	P53004	296 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	TMEM33	P57088	247 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	CCL8	P80075	99 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	PSG7	Q13046	419 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	RIN1	Q13671	783 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	GINS1	Q14691	196 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	FAM209A	Q5JX71	171 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	CYB5R2	Q6BCY4	276 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	CFAP77	Q6ZQR2	320 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	HS3ST5	Q8IZT8	346 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	IQCF1	Q8N6M8	205 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	OR9Q1	Q8NGQ5	310 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	OR6K6	Q8NGW6	343 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	DNAJC9	Q8WXX5	260 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	PTP4A1	Q93096	173 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	APOBEC3D	Q96AK3	386 aa	Predicted RBP	9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	OTULIN	Q96BN8	352 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	POM121	Q96HA1	1249 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	ATF6B	Q99941	703 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	NMNAT2	Q9BZQ4	307 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	SAP30L	Q9HAJ7	183 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	YAE1D1	Q9NRH1	226 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	KIF17	Q9P2E2	1029 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772	STARD10	Q9Y365	291 aa		9.46	□□□□□ -0.9
GGA1-222	ENST00000489772		F5H5K5	113 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	NCR1	O76036	304 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	IGHV1-46	P01743	117 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	HMGN1	P05114	100 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	GYPB	P06028	91 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	IGHV4-31	P0DP07	118 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	FCGR1A	P12314	374 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	ZNF23	P17027	643 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	PAICS	P22234	425 aa	Known RBP	9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	FAS	P25445	335 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	GZMK	P49863	264 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	CHN2	P52757	468 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	ATP6AP1	Q15904	470 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	TST	Q16762	297 aa	Known RBP	9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	CCDC121	Q6ZUS5	278 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	ZNRF4	Q8WWF5	429 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	GTF3A	Q92664	365 aa	Known RBP	9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	SPTSSA	Q969W0	71 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	UTP4	Q969X6	686 aa	Known RBP	9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	CMBL	Q96DG6	245 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	DIRC2	Q96SL1	478 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	EGLN1	Q9GZT9	426 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	POFUT1	Q9H488	388 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	NTN4	Q9HB63	628 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	PAPOLB	Q9NRJ5	636 aa	Known RBP	9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	ZDHHC8	Q9ULC8	765 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	AP4S1	Q9Y587	144 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	NAV3	Q8IVL0	2385 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	ARFGEF3	Q5TH69	2177 aa		9.45	□□□□□ -0.9
GGA1-222	ENST00000489772	IGHV1-69-2	A0A0G2JMI3	117 aa		9.44	□□□□□ -0.9
GGA1-222	ENST00000489772	LRP5L	A4QPB2	252 aa		9.44	□□□□□ -0.9
GGA1-222	ENST00000489772	ZSCAN5B	A6NJL1	495 aa		9.44	□□□□□ -0.9
GGA1-222	ENST00000489772	FAM183A	A6NL82	134 aa		9.44	□□□□□ -0.9
GGA1-222	ENST00000489772		A8MV72	311 aa	Predicted RBP	9.44	□□□□□ -0.9
GGA1-222	ENST00000489772	ZNF593	O00488	134 aa	Predicted RBP	9.44	□□□□□ -0.9
GGA1-222	ENST00000489772	PPIH	O43447	177 aa	Known RBP	9.44	□□□□□ -0.9
GGA1-222	ENST00000489772	CDC14B	O60729	498 aa		9.44	□□□□□ -0.9
GGA1-222	ENST00000489772	SPARC	P09486	303 aa		9.44	□□□□□ -0.9
GGA1-222	ENST00000489772	TACSTD2	P09758	323 aa		9.44	□□□□□ -0.9
GGA1-222	ENST00000489772	CLU	P10909	449 aa		9.44	□□□□□ -0.9
GGA1-222	ENST00000489772	RAC2	P15153	192 aa		9.44	□□□□□ -0.9
GGA1-222	ENST00000489772	KITLG	P21583	273 aa		9.44	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms