RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 IGHV3-9P01782 118 aa11.23□□□□□ -0.61
TOP3A-206ENST00000489131 APOC1P02654 83 aa11.23□□□□□ -0.61
TOP3A-206ENST00000489131 TMIGD3P0DMS9 266 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-206ENST00000489131 GLI4P10075 376 aa11.23□□□□□ -0.61
TOP3A-206ENST00000489131 SLC3A1Q07837 685 aa11.23□□□□□ -0.61
TOP3A-206ENST00000489131 MFGE8Q08431 387 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-206ENST00000489131 FAPQ12884 760 aa11.23□□□□□ -0.61
TOP3A-206ENST00000489131 FOXF2Q12947 444 aa11.23□□□□□ -0.61
TOP3A-206ENST00000489131 SLC36A2Q495M3 483 aa11.23□□□□□ -0.61
TOP3A-206ENST00000489131 SOWAHCQ53LP3 525 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-206ENST00000489131 KLHL24Q6TFL4 600 aa11.23□□□□□ -0.61
TOP3A-206ENST00000489131 LINC00299Q6ZSB3 139 aa11.23□□□□□ -0.61
TOP3A-206ENST00000489131 SLC16A14Q7RTX9 510 aa11.23□□□□□ -0.61
TOP3A-206ENST00000489131 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.23□□□□□ -0.61
TOP3A-206ENST00000489131 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-206ENST00000489131 RGP1Q92546 391 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-206ENST00000489131 HTRA1Q92743 480 aa11.23□□□□□ -0.61
TOP3A-206ENST00000489131 BCL2L2Q92843 193 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-206ENST00000489131 TMEM203Q969S6 136 aa11.23□□□□□ -0.61
TOP3A-206ENST00000489131 KCTD7Q96MP8 289 aa11.23□□□□□ -0.61
TOP3A-206ENST00000489131 DCLRE1CQ96SD1 692 aaKnown RBP11.23□□□□□ -0.61
TOP3A-206ENST00000489131 SH3GL3Q99963 347 aa11.23□□□□□ -0.61
TOP3A-206ENST00000489131 TMED9Q9BVK6 235 aa11.23□□□□□ -0.61
TOP3A-206ENST00000489131 OR2H1Q9GZK4 316 aa11.23□□□□□ -0.61
TOP3A-206ENST00000489131 C12orf49Q9H741 205 aa11.23□□□□□ -0.61
TOP3A-206ENST00000489131 NUFIP1Q9UHK0 495 aaKnown RBP11.23□□□□□ -0.61
TOP3A-206ENST00000489131 FBXL3Q9UKT7 428 aa11.23□□□□□ -0.61
TOP3A-206ENST00000489131 GSTK1Q9Y2Q3 226 aa11.23□□□□□ -0.61
TOP3A-206ENST00000489131 A3GALT2U3KPV4 340 aa11.23□□□□□ -0.61
TOP3A-206ENST00000489131 PHF3Q92576 2039 aaKnown RBP11.23□□□□□ -0.61
TOP3A-206ENST00000489131 LOC100506127A0A0U1RQW1 187 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 PNMA8CA0A1B0GUJ8 204 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 TMEM269A0A1B0GVZ9 245 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 LOC110117498-PIK3R3F6TDL0 507 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 LRRTM2O43300 516 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 SGCEO43556 437 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 RPP14O95059 124 aaKnown RBP11.22□□□□□ -0.61
TOP3A-206ENST00000489131 IL1AP01583 271 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 UCHL1P09936 223 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 ZNF32P17041 273 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 NR4A1P22736 598 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 IGHV1-2P23083 117 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 ARR3P36575 388 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 FOXG1P55316 489 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-206ENST00000489131 PSG4Q00888 419 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 TGFBR3Q03167 851 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 P2RY6Q15077 328 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 RSPO1Q2MKA7 263 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-206ENST00000489131 VWA1Q6PCB0 445 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 Q6ZSR3 168 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 BTLAQ7Z6A9 289 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 ELMOD2Q8IZ81 293 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 UBE2J2Q8N2K1 259 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 LRRC18Q8N456 261 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 C17orf78Q8N4C9 275 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 NAXEQ8NCW5 288 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 OR5AK2Q8NH90 309 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 NDNFQ8TB73 568 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 SPENQ96T58 3664 aaKnown RBP11.22□□□□□ -0.61
TOP3A-206ENST00000489131 PDCD1LG2Q9BQ51 273 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 COMMD4Q9H0A8 199 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 DCSTAMPQ9H295 470 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 SLC17A5Q9NRA2 495 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 CENPMQ9NSP4 180 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 B3GNT2Q9NY97 397 aa11.22□□□□□ -0.61
TOP3A-206ENST00000489131 CCDC59Q9P031 241 aaKnown RBP11.22□□□□□ -0.61
TOP3A-206ENST00000489131 FREM1Q5H8C1 2179 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 DSPP15924 2871 aaKnown RBP11.21□□□□□ -0.61
TOP3A-206ENST00000489131 TRAV1-2A0A0B4J238 106 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 E9PLN8 166 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 UBL3O95164 117 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 IGLV3-1P01715 115 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 RAF1P04049 648 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 UBCP0CG48 685 aaKnown RBP11.21□□□□□ -0.61
TOP3A-206ENST00000489131 ZNF182P17025 639 aaPredicted RBP11.21□□□□□ -0.61
TOP3A-206ENST00000489131 ACHEP22303 614 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 CCL1P22362 96 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 MTNR1BP49286 362 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 PER3P56645 1201 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 Q499Y3 187 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 ACSM3Q53FZ2 586 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 ZMAT1Q5H9K5 638 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 DRAM2Q6UX65 266 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 ZNF704Q6ZNC4 412 aaPredicted RBP11.21□□□□□ -0.61
TOP3A-206ENST00000489131 RPRMLQ8N4K4 120 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 ZNF433Q8N7K0 673 aaPredicted RBP11.21□□□□□ -0.61
TOP3A-206ENST00000489131 CNEP1R1Q8N9A8 125 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 OR1F12Q8NHA8 337 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 FGFBP3Q8TAT2 258 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 GPR148Q8TDV2 347 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 DMRTA2Q96SC8 542 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 VKORC1Q9BQB6 163 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 HDHD5Q9BXW7 423 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 NXF2Q9GZY0 626 aaKnown RBP11.21□□□□□ -0.61
TOP3A-206ENST00000489131 WNT5BQ9H1J7 359 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 PIGMQ9H3S5 423 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 OBP2BQ9NPH6 170 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 PLEK2Q9NYT0 353 aa11.21□□□□□ -0.61
TOP3A-206ENST00000489131 ZNF629Q9UEG4 869 aaPredicted RBP11.21□□□□□ -0.61
TOP3A-206ENST00000489131 OR52A1Q9UKL2 312 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms