RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 OCM2P0CE71 109 aa8.78□□□□□ -1
USP11-211ENST00000489111 UBCP0CG48 685 aaKnown RBP8.78□□□□□ -1
USP11-211ENST00000489111 CD79AP11912 226 aa8.78□□□□□ -1
USP11-211ENST00000489111 ZNF32P17041 273 aa8.78□□□□□ -1
USP11-211ENST00000489111 CALRP27797 417 aaKnown RBP8.78□□□□□ -1
USP11-211ENST00000489111 TIMP3P35625 211 aa8.78□□□□□ -1
USP11-211ENST00000489111 HTR5AP47898 357 aa8.78□□□□□ -1
USP11-211ENST00000489111 SLC6A9P48067 706 aa8.78□□□□□ -1
USP11-211ENST00000489111 MMP16P51512 607 aa8.78□□□□□ -1
USP11-211ENST00000489111 FOXF2Q12947 444 aa8.78□□□□□ -1
USP11-211ENST00000489111 INSL4Q14641 139 aa8.78□□□□□ -1
USP11-211ENST00000489111 ODF4Q2M2E3 257 aa8.78□□□□□ -1
USP11-211ENST00000489111 ACSM3Q53FZ2 586 aa8.78□□□□□ -1
USP11-211ENST00000489111 CCDC92Q53HC0 331 aaPredicted RBP8.78□□□□□ -1
USP11-211ENST00000489111 ZMAT1Q5H9K5 638 aa8.78□□□□□ -1
USP11-211ENST00000489111 ZNF774Q6NX45 483 aa8.78□□□□□ -1
USP11-211ENST00000489111 TMEM53Q6P2H8 277 aa8.78□□□□□ -1
USP11-211ENST00000489111 VWA1Q6PCB0 445 aa8.78□□□□□ -1
USP11-211ENST00000489111 TMEM91Q6ZNR0 172 aa8.78□□□□□ -1
USP11-211ENST00000489111 Q6ZT83 130 aa8.78□□□□□ -1
USP11-211ENST00000489111 SEM1Q6ZVN7 128 aa8.78□□□□□ -1
USP11-211ENST00000489111 LUZP2Q86TE4 346 aa8.78□□□□□ -1
USP11-211ENST00000489111 COMMD2Q86X83 199 aa8.78□□□□□ -1
USP11-211ENST00000489111 OR1K1Q8NGR3 316 aa8.78□□□□□ -1
USP11-211ENST00000489111 OR1F12Q8NHA8 337 aa8.78□□□□□ -1
USP11-211ENST00000489111 DYNC2LI1Q8TCX1 351 aa8.78□□□□□ -1
USP11-211ENST00000489111 GPR148Q8TDV2 347 aa8.78□□□□□ -1
USP11-211ENST00000489111 PHYHIPQ92561 330 aa8.78□□□□□ -1
USP11-211ENST00000489111 RNF166Q96A37 237 aaPredicted RBP8.78□□□□□ -1
USP11-211ENST00000489111 OR14A2Q96R54 314 aa8.78□□□□□ -1
USP11-211ENST00000489111 DCLRE1CQ96SD1 692 aaKnown RBP8.78□□□□□ -1
USP11-211ENST00000489111 KCNJ15Q99712 375 aa8.78□□□□□ -1
USP11-211ENST00000489111 SFXN3Q9BWM7 321 aa8.78□□□□□ -1
USP11-211ENST00000489111 BRD7Q9NPI1 651 aa8.78□□□□□ -1
USP11-211ENST00000489111 FAM206AQ9NX38 181 aa8.78□□□□□ -1
USP11-211ENST00000489111 SH3BGRL2Q9UJC5 107 aa8.78□□□□□ -1
USP11-211ENST00000489111 SLC22A13Q9Y226 551 aa8.78□□□□□ -1
USP11-211ENST00000489111 TNRC6AQ8NDV7 1962 aaKnown RBP8.78□□□□□ -1
USP11-211ENST00000489111 CHD8Q9HCK8 2581 aa8.78□□□□□ -1
USP11-211ENST00000489111 LOC107986453A0A1B0GWG9 222 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 CIB4A0PJX0 185 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 OR6C6A6NF89 314 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 F5H5K5 113 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 M0R135 149 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 CASKO14936 926 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 SRSF10O75494 262 aaKnown RBP8.77□□□□□ -1.01
USP11-211ENST00000489111 TNFSF13O75888 250 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 UBL3O95164 117 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 CDRT1O95170 752 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 IL18BPO95998 194 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 PNPP00491 289 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 IL1AP01583 271 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 HLA-HP01893 362 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 PATE4P0C8F1 98 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 GLI4P10075 376 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 ACHEP22303 614 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 ARR3P36575 388 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 MTNR1BP49286 362 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 FOXG1P55316 489 aaPredicted RBP8.77□□□□□ -1.01
USP11-211ENST00000489111 TPTEP56180 551 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 ZNF121P58317 390 aaPredicted RBP8.77□□□□□ -1.01
USP11-211ENST00000489111 UBE2NP61088 152 aaKnown RBP8.77□□□□□ -1.01
USP11-211ENST00000489111 PLP2Q04941 152 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 MXD1Q05195 221 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 LY6DQ14210 128 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 Q499Y3 187 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 HIKESHIQ53FT3 197 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 HSD17B12Q53GQ0 312 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 PABPC1L2AQ5JQF8 200 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 TMEM244Q5VVB8 128 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 BTLAQ7Z6A9 289 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 DOLPP1Q86YN1 238 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 RPRMLQ8N4K4 120 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 IL17RDQ8NFM7 739 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 AKR7LQ8NHP1 331 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 RGP1Q92546 391 aaPredicted RBP8.77□□□□□ -1.01
USP11-211ENST00000489111 ZNF799Q96GE5 643 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 MED18Q9BUE0 208 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 PBOV1Q9GZY1 135 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 SLITRK2Q9H156 845 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 WNT5BQ9H1J7 359 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 SP140LQ9H930 580 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 SNTG1Q9NSN8 517 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 NUFIP1Q9UHK0 495 aaKnown RBP8.77□□□□□ -1.01
USP11-211ENST00000489111 ATPIF1Q9UII2 106 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 TINAGQ9UJW2 476 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 DHDHQ9UQ10 334 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 ZNF835Q9Y2P0 537 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 N6AMT1Q9Y5N5 214 aa8.77□□□□□ -1.01
USP11-211ENST00000489111 CACNA1GO43497 2377 aa8.76□□□□□ -1.01
USP11-211ENST00000489111 ARPC4-TTLL3A0A0A6YYG9 625 aa8.76□□□□□ -1.01
USP11-211ENST00000489111 TRBV5-5A0A0J9YX44 114 aa8.76□□□□□ -1.01
USP11-211ENST00000489111 A0A1B0GVI7 797 aa8.76□□□□□ -1.01
USP11-211ENST00000489111 ACOD1A6NK06 481 aa8.76□□□□□ -1.01
USP11-211ENST00000489111 SYNGR3O43761 229 aa8.76□□□□□ -1.01
USP11-211ENST00000489111 RAD51DO75771 328 aa8.76□□□□□ -1.01
USP11-211ENST00000489111 SC5DO75845 299 aa8.76□□□□□ -1.01
USP11-211ENST00000489111 LYZL6O75951 148 aa8.76□□□□□ -1.01
USP11-211ENST00000489111 CLPXO76031 633 aa8.76□□□□□ -1.01
USP11-211ENST00000489111 TOXO94900 526 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms