RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 CMBLQ96DG6 245 aa21.22■□□□□ 0.99
HMGN1-217ENST00000489072 THTPAQ9BU02 230 aa21.22■□□□□ 0.99
HMGN1-217ENST00000489072 TREM2Q9NZC2 230 aa21.22■□□□□ 0.99
HMGN1-217ENST00000489072 CGGBP1Q9UFW8 167 aaPredicted RBP21.22■□□□□ 0.99
HMGN1-217ENST00000489072 PURGQ9UJV8 347 aaKnown RBP21.22■□□□□ 0.99
HMGN1-217ENST00000489072 SAMHD1Q9Y3Z3 626 aaKnown RBP21.22■□□□□ 0.99
HMGN1-217ENST00000489072 FAM157AC9JC47 383 aa21.21■□□□□ 0.99
HMGN1-217ENST00000489072 KITLGP21583 273 aa21.21■□□□□ 0.99
HMGN1-217ENST00000489072 TUBG1P23258 451 aa21.21■□□□□ 0.99
HMGN1-217ENST00000489072 LIPAP38571 399 aa21.21■□□□□ 0.99
HMGN1-217ENST00000489072 ERFP50548 548 aa21.21■□□□□ 0.99
HMGN1-217ENST00000489072 LMO4P61968 165 aa21.21■□□□□ 0.99
HMGN1-217ENST00000489072 MVKQ03426 396 aa21.21■□□□□ 0.99
HMGN1-217ENST00000489072 RSPO1Q2MKA7 263 aaPredicted RBP21.21■□□□□ 0.99
HMGN1-217ENST00000489072 ZNF362Q5T0B9 420 aaPredicted RBP21.21■□□□□ 0.99
HMGN1-217ENST00000489072 SLC18B1Q6NT16 456 aa21.21■□□□□ 0.99
HMGN1-217ENST00000489072 CFAP77Q6ZQR2 320 aa21.21■□□□□ 0.99
HMGN1-217ENST00000489072 Q6ZR03 302 aa21.21■□□□□ 0.99
HMGN1-217ENST00000489072 TRPM8Q7Z2W7 1104 aa21.21■□□□□ 0.99
HMGN1-217ENST00000489072 CYB561A3Q8NBI2 242 aa21.21■□□□□ 0.99
HMGN1-217ENST00000489072 COQ7Q99807 217 aa21.21■□□□□ 0.99
HMGN1-217ENST00000489072 HDHD2Q9H0R4 259 aa21.21■□□□□ 0.99
HMGN1-217ENST00000489072 REEP1Q9H902 201 aa21.21■□□□□ 0.99
HMGN1-217ENST00000489072 TUBG2Q9NRH3 451 aa21.21■□□□□ 0.99
HMGN1-217ENST00000489072 MRPL22Q9NWU5 206 aaKnown RBP21.21■□□□□ 0.99
HMGN1-217ENST00000489072 GGT2P36268 569 aa21.2■□□□□ 0.98
HMGN1-217ENST00000489072 HNRNPA0Q13151 305 aaKnown RBP21.2■□□□□ 0.98
HMGN1-217ENST00000489072 CDK5R2Q13319 367 aa21.2■□□□□ 0.98
HMGN1-217ENST00000489072 MICAQ29983 383 aa21.2■□□□□ 0.98
HMGN1-217ENST00000489072 ADGRG5Q8IZF4 528 aa21.2■□□□□ 0.98
HMGN1-217ENST00000489072 BCAS4Q8TDM0 211 aa21.2■□□□□ 0.98
HMGN1-217ENST00000489072 ZNRF4Q8WWF5 429 aa21.2■□□□□ 0.98
HMGN1-217ENST00000489072 ELMOD3Q96FG2 381 aa21.2■□□□□ 0.98
HMGN1-217ENST00000489072 LRGUKQ96M69 825 aa21.2■□□□□ 0.98
HMGN1-217ENST00000489072 DCLRE1CQ96SD1 692 aaKnown RBP21.2■□□□□ 0.98
HMGN1-217ENST00000489072 ZDHHC8Q9ULC8 765 aa21.2■□□□□ 0.98
HMGN1-217ENST00000489072 DYSFO75923 2080 aa21.19■□□□□ 0.98
HMGN1-217ENST00000489072 STAB1Q9NY15 2570 aa21.19■□□□□ 0.98
HMGN1-217ENST00000489072 UBOX5O94941 541 aa21.19■□□□□ 0.98
HMGN1-217ENST00000489072 CD55P08174 381 aa21.19■□□□□ 0.98
HMGN1-217ENST00000489072 RAP2AP10114 183 aa21.19■□□□□ 0.98
HMGN1-217ENST00000489072 PYCR1P32322 319 aa21.19■□□□□ 0.98
HMGN1-217ENST00000489072 TRAP1Q12931 704 aaKnown RBP21.19■□□□□ 0.98
HMGN1-217ENST00000489072 HFEQ30201 348 aa21.19■□□□□ 0.98
HMGN1-217ENST00000489072 SLC36A3Q495N2 470 aa21.19■□□□□ 0.98
HMGN1-217ENST00000489072 ZMAT1Q5H9K5 638 aa21.19■□□□□ 0.98
HMGN1-217ENST00000489072 OR4Q3Q8NH05 313 aa21.19■□□□□ 0.98
HMGN1-217ENST00000489072 POP5Q969H6 163 aaKnown RBP21.19■□□□□ 0.98
HMGN1-217ENST00000489072 HAVCR1Q96D42 359 aa21.19■□□□□ 0.98
HMGN1-217ENST00000489072 COG8Q96MW5 612 aa21.19■□□□□ 0.98
HMGN1-217ENST00000489072 TSSK6Q9BXA6 273 aa21.19■□□□□ 0.98
HMGN1-217ENST00000489072 DGCR6LQ9BY27 220 aa21.19■□□□□ 0.98
HMGN1-217ENST00000489072 TBC1D23Q9NUY8 699 aa21.19■□□□□ 0.98
HMGN1-217ENST00000489072 PTTG3PQ9NZH4 202 aa21.19■□□□□ 0.98
HMGN1-217ENST00000489072 CYB5R1Q9UHQ9 305 aa21.19■□□□□ 0.98
HMGN1-217ENST00000489072 WIPI2Q9Y4P8 454 aa21.19■□□□□ 0.98
HMGN1-217ENST00000489072 B4DSR2 109 aa21.18■□□□□ 0.98
HMGN1-217ENST00000489072 CLDN25C9JDP6 229 aa21.18■□□□□ 0.98
HMGN1-217ENST00000489072 J3QW42 95 aa21.18■□□□□ 0.98
HMGN1-217ENST00000489072 SOX14O95416 240 aa21.18■□□□□ 0.98
HMGN1-217ENST00000489072 HLA-DQA2P01906 255 aa21.18■□□□□ 0.98
HMGN1-217ENST00000489072 SRD5A1P18405 259 aa21.18■□□□□ 0.98
HMGN1-217ENST00000489072 RGS6P49758 472 aa21.18■□□□□ 0.98
HMGN1-217ENST00000489072 DVL1P1P54792 670 aaPredicted RBP21.18■□□□□ 0.98
HMGN1-217ENST00000489072 HLXQ14774 488 aaPredicted RBP21.18■□□□□ 0.98
HMGN1-217ENST00000489072 KRTAP27-1Q3LI81 207 aa21.18■□□□□ 0.98
HMGN1-217ENST00000489072 LNX2Q8N448 690 aa21.18■□□□□ 0.98
HMGN1-217ENST00000489072 SLC37A3Q8NCC5 494 aa21.18■□□□□ 0.98
HMGN1-217ENST00000489072 CCL17Q92583 94 aa21.18■□□□□ 0.98
HMGN1-217ENST00000489072 PTP4A1Q93096 173 aa21.18■□□□□ 0.98
HMGN1-217ENST00000489072 DIRC2Q96SL1 478 aa21.18■□□□□ 0.98
HMGN1-217ENST00000489072 CHID1Q9BWS9 393 aa21.18■□□□□ 0.98
HMGN1-217ENST00000489072 EGLN1Q9GZT9 426 aa21.18■□□□□ 0.98
HMGN1-217ENST00000489072 LPAR2Q9HBW0 351 aa21.18■□□□□ 0.98
HMGN1-217ENST00000489072 PNRC2Q9NPJ4 139 aaKnown RBP21.18■□□□□ 0.98
HMGN1-217ENST00000489072 WNK2Q9Y3S1 2297 aa21.17■□□□□ 0.98
HMGN1-217ENST00000489072 HNF1AP20823 631 aa21.17■□□□□ 0.98
HMGN1-217ENST00000489072 RBMXP38159 391 aaKnown RBP21.17■□□□□ 0.98
HMGN1-217ENST00000489072 TNFAIP6P98066 277 aaPredicted RBP21.17■□□□□ 0.98
HMGN1-217ENST00000489072 LYPD4Q6UWN0 246 aa21.17■□□□□ 0.98
HMGN1-217ENST00000489072 ARMC1Q9NVT9 282 aa21.17■□□□□ 0.98
HMGN1-217ENST00000489072 TMEFF2Q9UIK5 374 aaPredicted RBP21.17■□□□□ 0.98
HMGN1-217ENST00000489072 TVP23AA6NH52 213 aa21.16■□□□□ 0.98
HMGN1-217ENST00000489072 PSKH1P11801 424 aa21.16■□□□□ 0.98
HMGN1-217ENST00000489072 RAC2P15153 192 aa21.16■□□□□ 0.98
HMGN1-217ENST00000489072 FBXW12Q6X9E4 464 aa21.16■□□□□ 0.98
HMGN1-217ENST00000489072 CXXC5Q7LFL8 322 aaKnown RBP21.16■□□□□ 0.98
HMGN1-217ENST00000489072 PROKR2Q8NFJ6 384 aa21.16■□□□□ 0.98
HMGN1-217ENST00000489072 OR10G2Q8NGC3 310 aa21.16■□□□□ 0.98
HMGN1-217ENST00000489072 OR51L1Q8NGJ5 315 aa21.16■□□□□ 0.98
HMGN1-217ENST00000489072 OR9Q1Q8NGQ5 310 aa21.16■□□□□ 0.98
HMGN1-217ENST00000489072 CANT1Q8WVQ1 401 aa21.16■□□□□ 0.98
HMGN1-217ENST00000489072 APOBEC3DQ96AK3 386 aaPredicted RBP21.16■□□□□ 0.98
HMGN1-217ENST00000489072 SLC7A6OSQ96CW6 309 aaPredicted RBP21.16■□□□□ 0.98
HMGN1-217ENST00000489072 MAP6Q96JE9 813 aa21.16■□□□□ 0.98
HMGN1-217ENST00000489072 PITX2Q99697 317 aa21.16■□□□□ 0.98
HMGN1-217ENST00000489072 NIPSNAP1Q9BPW8 284 aa21.16■□□□□ 0.98
HMGN1-217ENST00000489072 CDADC1Q9BWV3 514 aa21.16■□□□□ 0.98
HMGN1-217ENST00000489072 ZNF665Q9H7R5 613 aa21.16■□□□□ 0.98
HMGN1-217ENST00000489072 DCAF16Q9NXF7 216 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms