RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 FAM27E3Q08E93 113 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 RSPO1Q2MKA7 263 aaPredicted RBP13.96□□□□□ -0.17
CLDN11-208ENST00000488989 PABPC1L2AQ5JQF8 200 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 ZNF774Q6NX45 483 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 FDX2Q6P4F2 183 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 FAM220AQ7Z4H9 259 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 FAM169BQ8N8A8 192 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 YIPF7Q8N8F6 280 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 OR1F12Q8NHA8 337 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 OPALINQ96PE5 141 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 MGLLQ99685 303 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 ATF6BQ99941 703 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 RNF121Q9H920 327 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 CENPMQ9NSP4 180 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 ACOXLQ9NUZ1 547 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 GNG8Q9UK08 70 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 SLC25A15Q9Y619 301 aa13.96□□□□□ -0.17
CLDN11-208ENST00000488989 C16orf97H3BN30 126 aa13.95□□□□□ -0.18
CLDN11-208ENST00000488989 OGG1O15527 345 aa13.95□□□□□ -0.18
CLDN11-208ENST00000488989 CD79AP11912 226 aa13.95□□□□□ -0.18
CLDN11-208ENST00000488989 CBR1P16152 277 aa13.95□□□□□ -0.18
CLDN11-208ENST00000488989 UGT2B10P36537 528 aa13.95□□□□□ -0.18
CLDN11-208ENST00000488989 GBX2P52951 348 aaPredicted RBP13.95□□□□□ -0.18
CLDN11-208ENST00000488989 TAS2R43P59537 309 aa13.95□□□□□ -0.18
CLDN11-208ENST00000488989 TUBA1BP68363 451 aa13.95□□□□□ -0.18
CLDN11-208ENST00000488989 TPBGQ13641 420 aa13.95□□□□□ -0.18
CLDN11-208ENST00000488989 TIGD6Q17RP2 521 aa13.95□□□□□ -0.18
CLDN11-208ENST00000488989 GSG1Q2KHT4 349 aa13.95□□□□□ -0.18
CLDN11-208ENST00000488989 CCDC58Q4VC31 144 aa13.95□□□□□ -0.18
CLDN11-208ENST00000488989 TUBA1AQ71U36 451 aa13.95□□□□□ -0.18
CLDN11-208ENST00000488989 SPATC1Q76KD6 591 aa13.95□□□□□ -0.18
CLDN11-208ENST00000488989 MDP1Q86V88 176 aa13.95□□□□□ -0.18
CLDN11-208ENST00000488989 KLBQ86Z14 1044 aa13.95□□□□□ -0.18
CLDN11-208ENST00000488989 ALDH16A1Q8IZ83 802 aa13.95□□□□□ -0.18
CLDN11-208ENST00000488989 AKR7LQ8NHP1 331 aa13.95□□□□□ -0.18
CLDN11-208ENST00000488989 KCNJ15Q99712 375 aa13.95□□□□□ -0.18
CLDN11-208ENST00000488989 HEATR1Q9H583 2144 aaKnown RBP13.95□□□□□ -0.18
CLDN11-208ENST00000488989 MOV10Q9HCE1 1003 aaKnown RBP13.95□□□□□ -0.18
CLDN11-208ENST00000488989 TRIM36Q9NQ86 728 aa13.95□□□□□ -0.18
CLDN11-208ENST00000488989 CRNNQ9UBG3 495 aaPredicted RBP13.95□□□□□ -0.18
CLDN11-208ENST00000488989 ST6GALNAC2Q9UJ37 374 aa13.95□□□□□ -0.18
CLDN11-208ENST00000488989 FBXL3Q9UKT7 428 aa13.95□□□□□ -0.18
CLDN11-208ENST00000488989 E9PI62 339 aa13.94□□□□□ -0.18
CLDN11-208ENST00000488989 IGKV3-15P01624 115 aa13.94□□□□□ -0.18
CLDN11-208ENST00000488989 CD1AP06126 327 aa13.94□□□□□ -0.18
CLDN11-208ENST00000488989 CPEP16870 476 aa13.94□□□□□ -0.18
CLDN11-208ENST00000488989 ZNF14P17017 642 aaPredicted RBP13.94□□□□□ -0.18
CLDN11-208ENST00000488989 PSMB9P28065 219 aa13.94□□□□□ -0.18
CLDN11-208ENST00000488989 HOXC12P31275 282 aa13.94□□□□□ -0.18
CLDN11-208ENST00000488989 MMP16P51512 607 aa13.94□□□□□ -0.18
CLDN11-208ENST00000488989 PSMA6P60900 246 aaKnown RBP13.94□□□□□ -0.18
CLDN11-208ENST00000488989 GPR50Q13585 617 aa13.94□□□□□ -0.18
CLDN11-208ENST00000488989 RAB39AQ14964 217 aa13.94□□□□□ -0.18
CLDN11-208ENST00000488989 C3orf36Q3SXR2 165 aa13.94□□□□□ -0.18
CLDN11-208ENST00000488989 ARMCX4Q5H9R4 360 aa13.94□□□□□ -0.18
CLDN11-208ENST00000488989 RPL22L1Q6P5R6 122 aaKnown RBP13.94□□□□□ -0.18
CLDN11-208ENST00000488989 XKRXQ6PP77 449 aa13.94□□□□□ -0.18
CLDN11-208ENST00000488989 SSX8Q7RTT4 187 aa13.94□□□□□ -0.18
CLDN11-208ENST00000488989 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.94□□□□□ -0.18
CLDN11-208ENST00000488989 ZNF584Q8IVC4 421 aa13.94□□□□□ -0.18
CLDN11-208ENST00000488989 ZNF808Q8N4W9 903 aaPredicted RBP13.94□□□□□ -0.18
CLDN11-208ENST00000488989 CPEB3Q8NE35 698 aaKnown RBP13.94□□□□□ -0.18
CLDN11-208ENST00000488989 OR13F1Q8NGS4 319 aa13.94□□□□□ -0.18
CLDN11-208ENST00000488989 RNASE6Q93091 150 aaKnown RBP13.94□□□□□ -0.18
CLDN11-208ENST00000488989 S100PBPQ96BU1 408 aa13.94□□□□□ -0.18
CLDN11-208ENST00000488989 R4GMQ9 66 aa13.94□□□□□ -0.18
CLDN11-208ENST00000488989 CHD6Q8TD26 2715 aa13.94□□□□□ -0.18
CLDN11-208ENST00000488989 ZNF462Q96JM2 2506 aa13.93□□□□□ -0.18
CLDN11-208ENST00000488989 ACOD1A6NK06 481 aa13.93□□□□□ -0.18
CLDN11-208ENST00000488989 PLPP2O43688 288 aa13.93□□□□□ -0.18
CLDN11-208ENST00000488989 PNPP00491 289 aa13.93□□□□□ -0.18
CLDN11-208ENST00000488989 IGLV1-44P01699 117 aa13.93□□□□□ -0.18
CLDN11-208ENST00000488989 APOC1P02654 83 aa13.93□□□□□ -0.18
CLDN11-208ENST00000488989 SERPINA5P05154 406 aa13.93□□□□□ -0.18
CLDN11-208ENST00000488989 PSMB10P40306 273 aa13.93□□□□□ -0.18
CLDN11-208ENST00000488989 HTR5AP47898 357 aa13.93□□□□□ -0.18
CLDN11-208ENST00000488989 CCR9P51686 369 aa13.93□□□□□ -0.18
CLDN11-208ENST00000488989 GTF2A1P52655 376 aaPredicted RBP13.93□□□□□ -0.18
CLDN11-208ENST00000488989 PLP2Q04941 152 aa13.93□□□□□ -0.18
CLDN11-208ENST00000488989 CDK5R1Q15078 307 aa13.93□□□□□ -0.18
CLDN11-208ENST00000488989 CDSNQ15517 529 aa13.93□□□□□ -0.18
CLDN11-208ENST00000488989 TAF13Q15543 124 aa13.93□□□□□ -0.18
CLDN11-208ENST00000488989 ZNF829Q3KNS6 432 aaPredicted RBP13.93□□□□□ -0.18
CLDN11-208ENST00000488989 DMKNQ6E0U4 476 aaPredicted RBP13.93□□□□□ -0.18
CLDN11-208ENST00000488989 CA5BP1Q8WTZ4 195 aa13.93□□□□□ -0.18
CLDN11-208ENST00000488989 ITLN2Q8WWU7 325 aaPredicted RBP13.93□□□□□ -0.18
CLDN11-208ENST00000488989 DCLRE1CQ96SD1 692 aaKnown RBP13.93□□□□□ -0.18
CLDN11-208ENST00000488989 ACTR6Q9GZN1 396 aa13.93□□□□□ -0.18
CLDN11-208ENST00000488989 GRIP1Q9Y3R0 1128 aa13.93□□□□□ -0.18
CLDN11-208ENST00000488989 SIRT4Q9Y6E7 314 aaPredicted RBP13.93□□□□□ -0.18
CLDN11-208ENST00000488989 RELNP78509 3460 aa13.92□□□□□ -0.18
CLDN11-208ENST00000488989 SPTBN1Q01082 2364 aaKnown RBP13.92□□□□□ -0.18
CLDN11-208ENST00000488989 IQCMA0A1B0GVH7 501 aa13.92□□□□□ -0.18
CLDN11-208ENST00000488989 FAM90A27PA6NNH2 459 aa13.92□□□□□ -0.18
CLDN11-208ENST00000488989 HSMCR30P0CW71 290 aa13.92□□□□□ -0.18
CLDN11-208ENST00000488989 PPP3CBP16298 524 aa13.92□□□□□ -0.18
CLDN11-208ENST00000488989 CD53P19397 219 aa13.92□□□□□ -0.18
CLDN11-208ENST00000488989 HSD11B1P28845 292 aa13.92□□□□□ -0.18
CLDN11-208ENST00000488989 TTKP33981 857 aa13.92□□□□□ -0.18
CLDN11-208ENST00000488989 LIPAP38571 399 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms