RNA–Protein interactions for RNA: ENST00000488601.6

POLR1C-208, Transcript of RNA polymerase I and III subunit C, human

TSL 2

Gene POLR1C, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1C-208	ENST00000488601	PSG1	P11464	419 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	CDH1	P12830	882 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	RPS2	P15880	293 aa	Known RBP	4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	GPX3	P22352	226 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	MDH2	P40926	338 aa	Known RBP	4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	RGS4	P49798	205 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	BMX	P51813	675 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	HMGA2	P52926	109 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	CD81	P60033	236 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	TBPL1	P62380	186 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	BLCAP	P62952	87 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	BASP1	P80723	227 aa	Known RBP	4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	CUL1	Q13616	776 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	NNAT	Q16517	81 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	SMN1	Q16637	294 aa	Known RBP	4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	LRRC75B	Q2VPJ9	315 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	TEX35	Q5T0J7	233 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	SEL1L2	Q5TEA6	688 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	METAP1D	Q6UB28	335 aa	Predicted RBP	4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	SNX32	Q86XE0	403 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	GCSAM	Q8N6F7	178 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	KLHL30-AS1	Q8NEE0	82 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	TRPV3	Q8NET8	790 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	PIFO	Q8TCI5	191 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	ZBTB9	Q96C00	473 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	SNF8	Q96H20	258 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	HES6	Q96HZ4	224 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	MS4A10	Q96PG2	267 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	MTERF1	Q99551	399 aa	Known RBP	4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	SLC25A33	Q9BSK2	321 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	RBM38	Q9H0Z9	239 aa	Known RBP	4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	TUBA4B	Q9H853	241 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	PARVB	Q9HBI1	364 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	CRLF2	Q9HC73	371 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	XAB2	Q9HCS7	855 aa	Known RBP	4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	EQTN	Q9NQ60	294 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	MIOX	Q9UGB7	285 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	TRMT6	Q9UJA5	497 aa	Known RBP	4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	NOSIP	Q9Y314	301 aa	Known RBP	4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	MAD1L1	Q9Y6D9	718 aa		4.58	□□□□□ -1.68
POLR1C-208	ENST00000488601	IGKV3D-15	A0A087WSY6	115 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	WDR91	A4D1P6	747 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601		H3BSH0	61 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	SOCS2	O14508	198 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	T	O15178	435 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	TM9SF1	O15321	606 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	RAD51C	O43502	376 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	SERPINI2	O75830	405 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	CBR1	P16152	277 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	NTS	P30990	170 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	ELK3	P41970	407 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	UBE2N	P61088	152 aa	Known RBP	4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	RPS23	P62266	143 aa	Known RBP	4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	NPRL3	Q12980	569 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	HNRNPA0	Q13151	305 aa	Known RBP	4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	PDE7A	Q13946	482 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	ZNF273	Q14593	569 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	RBBP5	Q15291	538 aa	Known RBP	4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	VWC2	Q2TAL6	325 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	KLHL26	Q53HC5	615 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	CPTP	Q5TA50	214 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	RNASEH2B	Q5TBB1	312 aa	Known RBP	4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	STEAP4	Q687X5	459 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	DUPD1	Q68J44	220 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	SLC27A4	Q6P1M0	643 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	GSG1L	Q6UXU4	331 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	CPNE9	Q8IYJ1	553 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	EEF1AKMT1	Q8WVE0	214 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	FAM162A	Q96A26	154 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	AIF1L	Q9BQI0	150 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	TMEM79	Q9BSE2	394 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	FBXO6	Q9NRD1	293 aa	Predicted RBP	4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	RCC2	Q9P258	522 aa	Known RBP	4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	DNAJB9	Q9UBS3	223 aa		4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	MACF1	Q9UPN3	7388 aa	Known RBP	4.57	□□□□□ -1.68
POLR1C-208	ENST00000488601	TANC2	Q9HCD6	1990 aa		4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601	IGLV3-9	A0A075B6K5	115 aa		4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601		A0A1W2PP11	408 aa		4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601	CLPTM1	O96005	669 aa		4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601	PTMS	P20962	102 aa		4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601	ZNF10	P21506	573 aa	Predicted RBP	4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601	EEF1B2	P24534	225 aa	Known RBP	4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601	SFTPD	P35247	375 aa		4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601	SAA4	P35542	130 aa		4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601	KCNJ1	P48048	391 aa		4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601	STXBP1	P61764	594 aa	Known RBP	4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601	ACSM1	Q08AH1	577 aa		4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601	HSPB3	Q12988	150 aa		4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601	WDR25	Q64LD2	544 aa	Predicted RBP	4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601	MBOAT1	Q6ZNC8	495 aa		4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601	ZNF695	Q8IW36	515 aa		4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601	ZNF283	Q8N7M2	679 aa		4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601	PRR26	Q8N8Z3	221 aa		4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601	OR2AJ1	Q8NGZ0	328 aa		4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601	THAP6	Q8TBB0	222 aa		4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601	CD200R1	Q8TD46	325 aa		4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601	MAIP1	Q8WWC4	291 aa		4.56	□□□□□ -1.68
POLR1C-208	ENST00000488601	RORB	Q92753	470 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms