RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ZNF442Q9H7R0 627 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 ADGRL4Q9HBW9 690 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 DDX28Q9NUL7 540 aaKnown RBP9.52□□□□□ -0.89
UBE4B-210ENST00000488228 ATPIF1Q9UII2 106 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 GRIP1Q9Y3R0 1128 aa9.52□□□□□ -0.89
UBE4B-210ENST00000488228 PRR32B1ATL7 298 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 TMCC2O75069 709 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 NGFP01138 241 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 CD8AP01732 235 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 LCKP06239 509 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 GABRB1P18505 474 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 HTR1FP30939 366 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 CDKN1AP38936 164 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 NUDT6P53370 316 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 RPS23P62266 143 aaKnown RBP9.51□□□□□ -0.89
UBE4B-210ENST00000488228 SNRPGP62308 76 aaKnown RBP9.51□□□□□ -0.89
UBE4B-210ENST00000488228 RIPK1Q13546 671 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 KRTAP27-1Q3LI81 207 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 ZNF544Q6NX49 715 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 SLC16A9Q7RTY1 509 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 DTX2Q86UW9 622 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 FBXL14Q8N1E6 418 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 MUC15Q8N387 334 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 OR51G2Q8NGK0 314 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 OR1J1Q8NGS3 322 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 OTOSQ8NHW6 89 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 APH1BQ8WW43 257 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 IGFBPL1Q8WX77 278 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 SYT3Q9BQG1 590 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 MRPL37Q9BZE1 423 aaKnown RBP9.51□□□□□ -0.89
UBE4B-210ENST00000488228 CENPMQ9NSP4 180 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 FAIMQ9NVQ4 179 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 H2AFY2Q9P0M6 372 aaPredicted RBP9.51□□□□□ -0.89
UBE4B-210ENST00000488228 MYEF2Q9P2K5 600 aaKnown RBP9.51□□□□□ -0.89
UBE4B-210ENST00000488228 COPS3Q9UNS2 423 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 SPEF1Q9Y4P9 236 aa9.51□□□□□ -0.89
UBE4B-210ENST00000488228 FLNAP21333 2647 aaKnown RBP9.51□□□□□ -0.89
UBE4B-210ENST00000488228 ZNF878C9JN71 531 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 F5H5K5 113 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 ICMTO60725 284 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 LYNP07948 512 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 GNAO1P09471 354 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 ACSM4P0C7M7 580 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 DNASE1P24855 282 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 PCSK6P29122 969 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 APOBEC3AP31941 199 aaPredicted RBP9.5□□□□□ -0.89
UBE4B-210ENST00000488228 GLRXP35754 106 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 SERPINF1P36955 418 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 CAPGP40121 348 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 SLC6A9P48067 706 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 UCP2P55851 309 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 PRSS12P56730 875 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 PPP1CBP62140 327 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 ADARB1P78563 741 aaKnown RBP9.5□□□□□ -0.89
UBE4B-210ENST00000488228 IL5RAQ01344 420 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 ZNF91Q05481 1191 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 ECH1Q13011 328 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 TAF13Q15543 124 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 RSPO1Q2MKA7 263 aaPredicted RBP9.5□□□□□ -0.89
UBE4B-210ENST00000488228 TMEM255AQ5JRV8 349 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 ZNF691Q5VV52 312 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 AGAP6Q5VW22 663 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 C11orf71Q6IPW1 123 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 RGS7BPQ6MZT1 257 aaPredicted RBP9.5□□□□□ -0.89
UBE4B-210ENST00000488228 LRP11Q86VZ4 500 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 SLC35F2Q8IXU6 374 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 DHRSXQ8N5I4 330 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 ZNF454Q8N9F8 522 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 SLC25A40Q8TBP6 338 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 RNF133Q8WVZ7 376 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 TRUB1Q8WWH5 349 aaKnown RBP9.5□□□□□ -0.89
UBE4B-210ENST00000488228 IPCEF1Q8WWN9 437 aaPredicted RBP9.5□□□□□ -0.89
UBE4B-210ENST00000488228 MRPL24Q96A35 216 aaKnown RBP9.5□□□□□ -0.89
UBE4B-210ENST00000488228 C4orf45Q96LM5 186 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 TBX5Q99593 518 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 APOL4Q9BPW4 351 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 BCL2L14Q9BZR8 327 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 PLK3Q9H4B4 646 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 CBLN4Q9NTU7 201 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 EIF3KQ9UBQ5 218 aaKnown RBP9.5□□□□□ -0.89
UBE4B-210ENST00000488228 WARS2Q9UGM6 360 aaKnown RBP9.5□□□□□ -0.89
UBE4B-210ENST00000488228 LAMP5Q9UJQ1 280 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 CMAHPQ9Y471 501 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 TANC2Q9HCD6 1990 aa9.5□□□□□ -0.89
UBE4B-210ENST00000488228 CREBBPQ92793 2442 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 A0A1W2PPW3 197 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 C5orf63A6NC05 138 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 M0R135 149 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 PSMD9O00233 223 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 WBP4O75554 376 aaKnown RBP9.49□□□□□ -0.89
UBE4B-210ENST00000488228 CLPTM1O96005 669 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 SBK2P0C263 348 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 SLC2A1P11166 492 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 MPV17P39210 176 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 OPRL1P41146 370 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 RAD52P43351 418 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 PRKXP51817 358 aa9.49□□□□□ -0.89
UBE4B-210ENST00000488228 SNRPD2P62316 118 aaKnown RBP9.49□□□□□ -0.89
UBE4B-210ENST00000488228 MAD2L1BPQ15013 274 aaPredicted RBP9.49□□□□□ -0.89
UBE4B-210ENST00000488228 OCLNQ16625 522 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms