RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 PITX2Q99697 317 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 ATF6BQ99941 703 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 HCAR1Q9BXC0 346 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 GSX1Q9H4S2 264 aaPredicted RBP15.58■□□□□ 0.08
COL1A1-207ENST00000486572 MED20Q9H944 212 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 TUBG2Q9NRH3 451 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 KRT84Q9NSB2 600 aa15.58■□□□□ 0.08
COL1A1-207ENST00000486572 NDUFS8O00217 210 aa15.57■□□□□ 0.08
COL1A1-207ENST00000486572 MT-ND5P03915 603 aa15.57■□□□□ 0.08
COL1A1-207ENST00000486572 DAOP14920 347 aa15.57■□□□□ 0.08
COL1A1-207ENST00000486572 RPS27P42677 84 aaKnown RBP15.57■□□□□ 0.08
COL1A1-207ENST00000486572 ENTPD1P49961 510 aa15.57■□□□□ 0.08
COL1A1-207ENST00000486572 CRISP1P54107 249 aa15.57■□□□□ 0.08
COL1A1-207ENST00000486572 ECH1Q13011 328 aa15.57■□□□□ 0.08
COL1A1-207ENST00000486572 CARTPTQ16568 116 aa15.57■□□□□ 0.08
COL1A1-207ENST00000486572 LINC01590Q5TEZ4 76 aa15.57■□□□□ 0.08
COL1A1-207ENST00000486572 TMEM154Q6P9G4 183 aa15.57■□□□□ 0.08
COL1A1-207ENST00000486572 ZNF511Q8NB15 262 aa15.57■□□□□ 0.08
COL1A1-207ENST00000486572 CENPNQ96H22 339 aaPredicted RBP15.57■□□□□ 0.08
COL1A1-207ENST00000486572 PLEKHA8Q96JA3 519 aa15.57■□□□□ 0.08
COL1A1-207ENST00000486572 MAP6Q96JE9 813 aa15.57■□□□□ 0.08
COL1A1-207ENST00000486572 PIMREGQ9BSJ6 248 aa15.57■□□□□ 0.08
COL1A1-207ENST00000486572 SEMA6AQ9H2E6 1030 aa15.57■□□□□ 0.08
COL1A1-207ENST00000486572 WDR76Q9H967 626 aa15.57■□□□□ 0.08
COL1A1-207ENST00000486572 PNRC2Q9NPJ4 139 aaKnown RBP15.57■□□□□ 0.08
COL1A1-207ENST00000486572 HINT3Q9NQE9 182 aaKnown RBP15.57■□□□□ 0.08
COL1A1-207ENST00000486572 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.57■□□□□ 0.08
COL1A1-207ENST00000486572 LOC390937A0A1W2PQ73 354 aa15.56■□□□□ 0.08
COL1A1-207ENST00000486572 C17orf100A8MU93 164 aa15.56■□□□□ 0.08
COL1A1-207ENST00000486572 PRR23D1E9PI22 279 aaPredicted RBP15.56■□□□□ 0.08
COL1A1-207ENST00000486572 SPARCP09486 303 aa15.56■□□□□ 0.08
COL1A1-207ENST00000486572 PRR23D2P0DMB1 279 aaPredicted RBP15.56■□□□□ 0.08
COL1A1-207ENST00000486572 ESRRGP62508 458 aa15.56■□□□□ 0.08
COL1A1-207ENST00000486572 PCK2Q16822 640 aa15.56■□□□□ 0.08
COL1A1-207ENST00000486572 TMEM236Q5W0B7 351 aa15.56■□□□□ 0.08
COL1A1-207ENST00000486572 ZFP1Q6P2D0 407 aa15.56■□□□□ 0.08
COL1A1-207ENST00000486572 PLBD1Q6P4A8 553 aa15.56■□□□□ 0.08
COL1A1-207ENST00000486572 CLEC9AQ6UXN8 241 aa15.56■□□□□ 0.08
COL1A1-207ENST00000486572 MAPK1IP1LQ8NDC0 245 aa15.56■□□□□ 0.08
COL1A1-207ENST00000486572 PTP4A1Q93096 173 aa15.56■□□□□ 0.08
COL1A1-207ENST00000486572 RAB3IPQ96QF0 476 aaPredicted RBP15.56■□□□□ 0.08
COL1A1-207ENST00000486572 OAZ3Q9UMX2 235 aa15.56■□□□□ 0.08
COL1A1-207ENST00000486572 A0A096LNT2 108 aa15.55■□□□□ 0.08
COL1A1-207ENST00000486572 PLSCR5A0PG75 271 aa15.55■□□□□ 0.08
COL1A1-207ENST00000486572 GLCEO94923 617 aa15.55■□□□□ 0.08
COL1A1-207ENST00000486572 PSKH1P11801 424 aa15.55■□□□□ 0.08
COL1A1-207ENST00000486572 PCGF3Q3KNV8 242 aa15.55■□□□□ 0.08
COL1A1-207ENST00000486572 KRTAP27-1Q3LI81 207 aa15.55■□□□□ 0.08
COL1A1-207ENST00000486572 TMEM255AQ5JRV8 349 aa15.55■□□□□ 0.08
COL1A1-207ENST00000486572 TEX30Q5JUR7 227 aa15.55■□□□□ 0.08
COL1A1-207ENST00000486572 KDM4DQ6B0I6 523 aa15.55■□□□□ 0.08
COL1A1-207ENST00000486572 DCXRQ7Z4W1 244 aa15.55■□□□□ 0.08
COL1A1-207ENST00000486572 C10orf67Q8IYJ2 551 aa15.55■□□□□ 0.08
COL1A1-207ENST00000486572 ZNF786Q8N393 782 aa15.55■□□□□ 0.08
COL1A1-207ENST00000486572 OR10S1Q8NGN2 331 aa15.55■□□□□ 0.08
COL1A1-207ENST00000486572 UBASH3BQ8TF42 649 aa15.55■□□□□ 0.08
COL1A1-207ENST00000486572 APOBEC3DQ96AK3 386 aaPredicted RBP15.55■□□□□ 0.08
COL1A1-207ENST00000486572 OR51V1Q9H2C8 321 aa15.55■□□□□ 0.08
COL1A1-207ENST00000486572 POFUT1Q9H488 388 aa15.55■□□□□ 0.08
COL1A1-207ENST00000486572 DDX28Q9NUL7 540 aaKnown RBP15.55■□□□□ 0.08
COL1A1-207ENST00000486572 CGGBP1Q9UFW8 167 aaPredicted RBP15.55■□□□□ 0.08
COL1A1-207ENST00000486572 ENOPH1Q9UHY7 261 aa15.55■□□□□ 0.08
COL1A1-207ENST00000486572 STARD10Q9Y365 291 aa15.55■□□□□ 0.08
COL1A1-207ENST00000486572 VWC2LB2RUY7 222 aa15.54■□□□□ 0.08
COL1A1-207ENST00000486572 H3BNX3 289 aa15.54■□□□□ 0.08
COL1A1-207ENST00000486572 ZNF593O00488 134 aaPredicted RBP15.54■□□□□ 0.08
COL1A1-207ENST00000486572 PRODHO43272 600 aa15.54■□□□□ 0.08
COL1A1-207ENST00000486572 MITFO75030 526 aaPredicted RBP15.54■□□□□ 0.08
COL1A1-207ENST00000486572 LY6G6DO95868 133 aa15.54■□□□□ 0.08
COL1A1-207ENST00000486572 HEXAP06865 529 aa15.54■□□□□ 0.08
COL1A1-207ENST00000486572 ACSM4P0C7M7 580 aa15.54■□□□□ 0.08
COL1A1-207ENST00000486572 IGFBP5P24593 272 aa15.54■□□□□ 0.08
COL1A1-207ENST00000486572 GSTT1P30711 240 aa15.54■□□□□ 0.08
COL1A1-207ENST00000486572 ZNF81P51508 661 aa15.54■□□□□ 0.08
COL1A1-207ENST00000486572 MMP15P51511 669 aa15.54■□□□□ 0.08
COL1A1-207ENST00000486572 PTGES3Q15185 160 aaKnown RBP15.54■□□□□ 0.08
COL1A1-207ENST00000486572 RSPO1Q2MKA7 263 aaPredicted RBP15.54■□□□□ 0.08
COL1A1-207ENST00000486572 CPOQ8IVL8 374 aa15.54■□□□□ 0.08
COL1A1-207ENST00000486572 OR5L1Q8NGL2 311 aa15.54■□□□□ 0.08
COL1A1-207ENST00000486572 GTF3AQ92664 365 aaKnown RBP15.54■□□□□ 0.08
COL1A1-207ENST00000486572 INTS14Q96SY0 518 aa15.54■□□□□ 0.08
COL1A1-207ENST00000486572 PRRG3Q9BZD7 231 aa15.54■□□□□ 0.08
COL1A1-207ENST00000486572 MARCH7Q9H992 704 aa15.54■□□□□ 0.08
COL1A1-207ENST00000486572 CYSLTR2Q9NS75 346 aa15.54■□□□□ 0.08
COL1A1-207ENST00000486572 NKIRAS2Q9NYR9 191 aa15.54■□□□□ 0.08
COL1A1-207ENST00000486572 TVP23BQ9NYZ1 205 aa15.54■□□□□ 0.08
COL1A1-207ENST00000486572 SAC3D1A6NKF1 404 aa15.53■□□□□ 0.08
COL1A1-207ENST00000486572 F5H5K5 113 aa15.53■□□□□ 0.08
COL1A1-207ENST00000486572 TIMM8AO60220 97 aaPredicted RBP15.53■□□□□ 0.08
COL1A1-207ENST00000486572 NCR1O76036 304 aa15.53■□□□□ 0.08
COL1A1-207ENST00000486572 HPXP02790 462 aa15.53■□□□□ 0.08
COL1A1-207ENST00000486572 LIPAP38571 399 aa15.53■□□□□ 0.08
COL1A1-207ENST00000486572 NR4A2P43354 598 aa15.53■□□□□ 0.08
COL1A1-207ENST00000486572 MAGEB1P43366 347 aa15.53■□□□□ 0.08
COL1A1-207ENST00000486572 LOXL1Q08397 574 aaPredicted RBP15.53■□□□□ 0.08
COL1A1-207ENST00000486572 PSG7Q13046 419 aa15.53■□□□□ 0.08
COL1A1-207ENST00000486572 SNAPC1Q16533 368 aa15.53■□□□□ 0.08
COL1A1-207ENST00000486572 ZMAT1Q5H9K5 638 aa15.53■□□□□ 0.08
COL1A1-207ENST00000486572 COLCA1Q6ZS62 124 aa15.53■□□□□ 0.08
COL1A1-207ENST00000486572 ERI1Q8IV48 349 aaKnown RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms