RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 SLC36A3Q495N2 470 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 SPRNQ5BIV9 151 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 PGM2L1Q6PCE3 622 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 NPEPL1Q8NDH3 523 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 OR2Z1Q8NG97 314 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 OR8D4Q8NGM9 314 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 ASB9Q96DX5 294 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 DCLRE1CQ96SD1 692 aaKnown RBP15.01□□□□□ -0.01
COL6A1-204ENST00000486023 CHID1Q9BWS9 393 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 WDR76Q9H967 626 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 TMEM160Q9NX00 188 aa15.01□□□□□ -0.01
COL6A1-204ENST00000486023 TMEFF2Q9UIK5 374 aaPredicted RBP15.01□□□□□ -0.01
COL6A1-204ENST00000486023 PURGQ9UJV8 347 aaKnown RBP15.01□□□□□ -0.01
COL6A1-204ENST00000486023 CHD3Q12873 2000 aaKnown RBP15□□□□□ -0.01
COL6A1-204ENST00000486023 SVEP1Q4LDE5 3571 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 ISPDA4D126 451 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 FAM157AC9JC47 383 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 CLDN25C9JDP6 229 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 CST1P01037 141 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 RAP2AP10114 183 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 SRP14P37108 136 aaKnown RBP15□□□□□ -0.01
COL6A1-204ENST00000486023 LIPAP38571 399 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 CDH15P55291 814 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 TNFAIP6P98066 277 aaPredicted RBP15□□□□□ -0.01
COL6A1-204ENST00000486023 FAM209AQ5JX71 171 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 RPL13AP3Q6NVV1 102 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 RASSF6Q6ZTQ3 369 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 SPATA24Q86W54 205 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 SLC26A10Q8NG04 563 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 OR10G2Q8NGC3 310 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 OR5L1Q8NGL2 311 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 OR9Q1Q8NGQ5 310 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 PTP4A1Q93096 173 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 OTULINQ96BN8 352 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 TIMD4Q96H15 378 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 RACGAP1Q9H0H5 632 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 C1orf21Q9H246 121 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 ARMC1Q9NVT9 282 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 ZDHHC8Q9ULC8 765 aa15□□□□□ -0.01
COL6A1-204ENST00000486023 ATRQ13535 2644 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 B4DSR2 109 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 BHLHE40O14503 412 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 PRSS12P56730 875 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 ZMAT1Q5H9K5 638 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 OR2T2Q6IF00 324 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 ZNF770Q6IQ21 691 aaPredicted RBP14.99□□□□□ -0.01
COL6A1-204ENST00000486023 SLC18B1Q6NT16 456 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 CFAP77Q6ZQR2 320 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 ZBTB46Q86UZ6 589 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 ATG16L2Q8NAA4 619 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 SLC37A3Q8NCC5 494 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 CANT1Q8WVQ1 401 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 ZNRF4Q8WWF5 429 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 RAB1CQ92928 201 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 HAVCR1Q96D42 359 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 COQ7Q99807 217 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 HDHD2Q9H0R4 259 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 IL20Q9NYY1 176 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 UBAP1Q9NZ09 502 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 KLHL21Q9UJP4 597 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 WIPI2Q9Y4P8 454 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 N6AMT1Q9Y5N5 214 aa14.99□□□□□ -0.01
COL6A1-204ENST00000486023 FBN1P35555 2871 aaKnown RBP14.99□□□□□ -0.01
COL6A1-204ENST00000486023 RNF212BA8MTL3 300 aa14.98□□□□□ -0.01
COL6A1-204ENST00000486023 H3BN98 237 aa14.98□□□□□ -0.01
COL6A1-204ENST00000486023 H3BSA7 217 aa14.98□□□□□ -0.01
COL6A1-204ENST00000486023 ACOT8O14734 319 aa14.98□□□□□ -0.01
COL6A1-204ENST00000486023 ICMTO60725 284 aa14.98□□□□□ -0.01
COL6A1-204ENST00000486023 GYPBP06028 91 aa14.98□□□□□ -0.01
COL6A1-204ENST00000486023 TNFSF4P23510 183 aa14.98□□□□□ -0.01
COL6A1-204ENST00000486023 SRSF2Q01130 221 aaKnown RBP14.98□□□□□ -0.01
COL6A1-204ENST00000486023 COX10Q12887 443 aa14.98□□□□□ -0.01
COL6A1-204ENST00000486023 TRAP1Q12931 704 aaKnown RBP14.98□□□□□ -0.01
COL6A1-204ENST00000486023 LYPD4Q6UWN0 246 aa14.98□□□□□ -0.01
COL6A1-204ENST00000486023 NAA40Q86UY6 237 aa14.98□□□□□ -0.01
COL6A1-204ENST00000486023 GLCCI1Q86VQ1 547 aa14.98□□□□□ -0.01
COL6A1-204ENST00000486023 ADGRG5Q8IZF4 528 aa14.98□□□□□ -0.01
COL6A1-204ENST00000486023 BHLHE23Q8NDY6 225 aa14.98□□□□□ -0.01
COL6A1-204ENST00000486023 OR2T4Q8NH00 348 aa14.98□□□□□ -0.01
COL6A1-204ENST00000486023 OR4Q3Q8NH05 313 aa14.98□□□□□ -0.01
COL6A1-204ENST00000486023 GIPC3Q8TF64 312 aa14.98□□□□□ -0.01
COL6A1-204ENST00000486023 COG8Q96MW5 612 aa14.98□□□□□ -0.01
COL6A1-204ENST00000486023 DIRC2Q96SL1 478 aa14.98□□□□□ -0.01
COL6A1-204ENST00000486023 NIPSNAP1Q9BPW8 284 aa14.98□□□□□ -0.01
COL6A1-204ENST00000486023 HIF1ANQ9NWT6 349 aa14.98□□□□□ -0.01
COL6A1-204ENST00000486023 MRPL22Q9NWU5 206 aaKnown RBP14.98□□□□□ -0.01
COL6A1-204ENST00000486023 FAM53CQ9NYF3 392 aa14.98□□□□□ -0.01
COL6A1-204ENST00000486023 YLPM1P49750 1951 aaKnown RBP14.97□□□□□ -0.01
COL6A1-204ENST00000486023 IGHV3-64DA0A0J9YX35 117 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 DHRS12A0PJE2 317 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 E2F6O75461 281 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 LCATP04180 440 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 SPARCP09486 303 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 TUBG1P23258 451 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 POU1F1P28069 291 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 GGT2P36268 569 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 RGS6P49758 472 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 LMO4P61968 165 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 HIST1H3AP68431 136 aa14.97□□□□□ -0.01
COL6A1-204ENST00000486023 CDK5R2Q13319 367 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms