RNA–Protein interactions for RNA: ENST00000485947.1

VIM-205, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-205ENST00000485947 OR6N2Q8NGY6 317 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 OR52N1Q8NH53 320 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 RORBQ92753 470 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 MUL1Q969V5 352 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 COX4I2Q96KJ9 171 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 WDR76Q9H967 626 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 ERVK13-1Q9NX77 482 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 NPAP1Q9NZP6 1156 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 KCNG2Q9UJ96 466 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 LAMP3Q9UQV4 416 aa14.82□□□□□ -0.04
VIM-205ENST00000485947 CAB39Q9Y376 341 aaPredicted RBP14.82□□□□□ -0.04
VIM-205ENST00000485947 FLNAP21333 2647 aaKnown RBP14.82□□□□□ -0.04
VIM-205ENST00000485947 DAPL1A0PJW8 107 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 TVP23AA6NH52 213 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 ZNF99A8MXY4 864 aaPredicted RBP14.81□□□□□ -0.04
VIM-205ENST00000485947 SHISA9B4DS77 424 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 ZNF670-ZNF695F2Z2N8 137 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 RPL36A-HNRNPH2H7BZ11 118 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 ABCD4O14678 606 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 SELENOFO60613 162 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 ADRA2AP08913 450 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 LIMS3P0CW19 117 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 LIMS4P0CW20 117 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 CD40P25942 277 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 GUCA1AP43080 201 aaPredicted RBP14.81□□□□□ -0.04
VIM-205ENST00000485947 CAPZA2P47755 286 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 ENTPD1P49961 510 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 ETV1P50549 477 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 ATP5J2P56134 94 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 DBPQ10586 325 aaPredicted RBP14.81□□□□□ -0.04
VIM-205ENST00000485947 NEDD8Q15843 81 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 KCNMB1Q16558 191 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 C3orf36Q3SXR2 165 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 TEX30Q5JUR7 227 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 AGAP6Q5VW22 663 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 KLHL36Q8N4N3 616 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 WDR31Q8NA23 367 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 KBTBD8Q8NFY9 601 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 OR10H4Q8NGA5 316 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 OR10H5Q8NGA6 315 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 OR52N5Q8NH56 324 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 NSMAFQ92636 917 aa14.81□□□□□ -0.04
VIM-205ENST00000485947 MRPL22Q9NWU5 206 aaKnown RBP14.81□□□□□ -0.04
VIM-205ENST00000485947 A0A1W2PPL8 197 aa14.8□□□□□ -0.04
VIM-205ENST00000485947 PTHP01270 115 aa14.8□□□□□ -0.04
VIM-205ENST00000485947 SOD3P08294 240 aa14.8□□□□□ -0.04
VIM-205ENST00000485947 ZNF823P16415 610 aa14.8□□□□□ -0.04
VIM-205ENST00000485947 WNT4P56705 351 aa14.8□□□□□ -0.04
VIM-205ENST00000485947 ACTA2P62736 377 aa14.8□□□□□ -0.04
VIM-205ENST00000485947 ACTG2P63267 376 aa14.8□□□□□ -0.04
VIM-205ENST00000485947 PCK2Q16822 640 aa14.8□□□□□ -0.04
VIM-205ENST00000485947 PHYHD1Q5SRE7 291 aa14.8□□□□□ -0.04
VIM-205ENST00000485947 ZNF544Q6NX49 715 aa14.8□□□□□ -0.04
VIM-205ENST00000485947 LYPD4Q6UWN0 246 aa14.8□□□□□ -0.04
VIM-205ENST00000485947 TMPRSS11AQ6ZMR5 421 aa14.8□□□□□ -0.04
VIM-205ENST00000485947 CCDC36Q8IYA8 594 aa14.8□□□□□ -0.04
VIM-205ENST00000485947 FAM169BQ8N8A8 192 aa14.8□□□□□ -0.04
VIM-205ENST00000485947 ZNF454Q8N9F8 522 aa14.8□□□□□ -0.04
VIM-205ENST00000485947 Q96MF0 132 aa14.8□□□□□ -0.04
VIM-205ENST00000485947 DHRS9Q9BPW9 319 aa14.8□□□□□ -0.04
VIM-205ENST00000485947 ZNF649Q9BS31 505 aa14.8□□□□□ -0.04
VIM-205ENST00000485947 ALG8Q9BVK2 526 aa14.8□□□□□ -0.04
VIM-205ENST00000485947 BARX1Q9HBU1 254 aaPredicted RBP14.8□□□□□ -0.04
VIM-205ENST00000485947 ISYNA1Q9NPH2 558 aa14.8□□□□□ -0.04
VIM-205ENST00000485947 LSM2Q9Y333 95 aaKnown RBP14.8□□□□□ -0.04
VIM-205ENST00000485947 CADP27708 2225 aa14.8□□□□□ -0.04
VIM-205ENST00000485947 ARPC4-TTLL3A0A0A6YYG9 625 aa14.79□□□□□ -0.04
VIM-205ENST00000485947 A0A1W2PQL4 384 aaPredicted RBP14.79□□□□□ -0.04
VIM-205ENST00000485947 UPK3AO75631 287 aa14.79□□□□□ -0.04
VIM-205ENST00000485947 BMP4P12644 408 aa14.79□□□□□ -0.04
VIM-205ENST00000485947 NPR2P20594 1047 aa14.79□□□□□ -0.04
VIM-205ENST00000485947 MRPS34P82930 218 aaKnown RBP14.79□□□□□ -0.04
VIM-205ENST00000485947 ZNF85Q03923 595 aa14.79□□□□□ -0.04
VIM-205ENST00000485947 SPHARQ15513 63 aa14.79□□□□□ -0.04
VIM-205ENST00000485947 SYT6Q5T7P8 510 aaPredicted RBP14.79□□□□□ -0.04
VIM-205ENST00000485947 ANKRD16Q6P6B7 361 aa14.79□□□□□ -0.04
VIM-205ENST00000485947 SLC22A25Q6T423 547 aa14.79□□□□□ -0.04
VIM-205ENST00000485947 LHFPL3Q86UP9 236 aa14.79□□□□□ -0.04
VIM-205ENST00000485947 SYS1Q8N2H4 156 aa14.79□□□□□ -0.04
VIM-205ENST00000485947 OTOSQ8NHW6 89 aa14.79□□□□□ -0.04
VIM-205ENST00000485947 ASB17Q8WXJ9 295 aa14.79□□□□□ -0.04
VIM-205ENST00000485947 TBX5Q99593 518 aa14.79□□□□□ -0.04
VIM-205ENST00000485947 TRAF4Q9BUZ4 470 aaPredicted RBP14.79□□□□□ -0.04
VIM-205ENST00000485947 NELFAQ9H3P2 528 aa14.79□□□□□ -0.04
VIM-205ENST00000485947 GPR35Q9HC97 309 aa14.79□□□□□ -0.04
VIM-205ENST00000485947 POLE4Q9NR33 117 aa14.79□□□□□ -0.04
VIM-205ENST00000485947 CLEC2DQ9UHP7 191 aa14.79□□□□□ -0.04
VIM-205ENST00000485947 LAMP5Q9UJQ1 280 aa14.79□□□□□ -0.04
VIM-205ENST00000485947 UGT2A1Q9Y4X1 527 aa14.79□□□□□ -0.04
VIM-205ENST00000485947 ZNF593O00488 134 aaPredicted RBP14.78□□□□□ -0.04
VIM-205ENST00000485947 GPANK1O95872 356 aa14.78□□□□□ -0.04
VIM-205ENST00000485947 LCKP06239 509 aa14.78□□□□□ -0.04
VIM-205ENST00000485947 ALOX5APP20292 161 aa14.78□□□□□ -0.04
VIM-205ENST00000485947 MSR1P21757 451 aa14.78□□□□□ -0.04
VIM-205ENST00000485947 ZNF83P51522 516 aa14.78□□□□□ -0.04
VIM-205ENST00000485947 FOXG1P55316 489 aaPredicted RBP14.78□□□□□ -0.04
VIM-205ENST00000485947 LSM6P62312 80 aaKnown RBP14.78□□□□□ -0.04
VIM-205ENST00000485947 RAB39AQ14964 217 aa14.78□□□□□ -0.04
VIM-205ENST00000485947 MED22Q15528 200 aa14.78□□□□□ -0.04
VIM-205ENST00000485947 NRN1LQ496H8 165 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms