RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, human

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR3-210	ENST00000484596	ANKRD26P1	Q6NSI1	321 aa		4.63	□□□□□ -1.67
UBR3-210	ENST00000484596	ZNF544	Q6NX49	715 aa		4.63	□□□□□ -1.67
UBR3-210	ENST00000484596	SLC7A13	Q8TCU3	470 aa		4.63	□□□□□ -1.67
UBR3-210	ENST00000484596	C7orf33	Q8WU49	177 aa		4.63	□□□□□ -1.67
UBR3-210	ENST00000484596	MARC2	Q969Z3	335 aa		4.63	□□□□□ -1.67
UBR3-210	ENST00000484596	LRRC39	Q96DD0	335 aa		4.63	□□□□□ -1.67
UBR3-210	ENST00000484596	MED8	Q96G25	268 aa		4.63	□□□□□ -1.67
UBR3-210	ENST00000484596	CATSPER2	Q96P56	530 aa		4.63	□□□□□ -1.67
UBR3-210	ENST00000484596	LLPH	Q9BRT6	129 aa	Known RBP	4.63	□□□□□ -1.67
UBR3-210	ENST00000484596	MRPL37	Q9BZE1	423 aa	Known RBP	4.63	□□□□□ -1.67
UBR3-210	ENST00000484596	ASB8	Q9H765	288 aa		4.63	□□□□□ -1.67
UBR3-210	ENST00000484596	SLC25A22	Q9H936	323 aa		4.63	□□□□□ -1.67
UBR3-210	ENST00000484596	PARVG	Q9HBI0	331 aa		4.63	□□□□□ -1.67
UBR3-210	ENST00000484596	TMEM165	Q9HC07	324 aa		4.63	□□□□□ -1.67
UBR3-210	ENST00000484596	LYRM4	Q9HD34	91 aa		4.63	□□□□□ -1.67
UBR3-210	ENST00000484596	CHRAC1	Q9NRG0	131 aa		4.63	□□□□□ -1.67
UBR3-210	ENST00000484596	ZNF318	Q5VUA4	2279 aa		4.63	□□□□□ -1.67
UBR3-210	ENST00000484596	DOCK2	Q92608	1830 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	ATAD5	Q96QE3	1844 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	DOCK3	Q8IZD9	2030 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	KBTBD11-OT1	A0A1B0GTJ5	212 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	C12orf71	A8MTZ7	269 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	OTC	P00480	354 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	ALDOB	P05062	364 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	DUX4L4	P0CJ87	422 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	PRKACB	P22694	351 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	CPN2	P22792	545 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	GPR6	P46095	362 aa	Predicted RBP	4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	SLC11A1	P49279	550 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	SUB1	P53999	127 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	APOC4	P55056	127 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	ITIH4	Q14624	930 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	XKR4	Q5GH76	650 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	OTP	Q5XKR4	325 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	CNIH2	Q6PI25	160 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	GPX8	Q8TED1	209 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	ARPC1A	Q92747	370 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	ROGDI	Q9GZN7	287 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	BLZF1	Q9H2G9	400 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	SIAE	Q9HAT2	523 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	CLN8	Q9UBY8	286 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	GMEB1	Q9Y692	573 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	MYO5A	Q9Y4I1	1855 aa	Known RBP	4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	XIRP2	A4UGR9	3374 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	CROCC	Q5TZA2	2017 aa		4.62	□□□□□ -1.67
UBR3-210	ENST00000484596	PLXNB2	O15031	1838 aa		4.61	□□□□□ -1.67
UBR3-210	ENST00000484596	SIPA1L1	O43166	1804 aa		4.61	□□□□□ -1.67
UBR3-210	ENST00000484596		A0A0J9YXY3	114 aa		4.61	□□□□□ -1.67
UBR3-210	ENST00000484596	RRP8	O43159	456 aa	Known RBP	4.61	□□□□□ -1.67
UBR3-210	ENST00000484596	EIF3G	O75821	320 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
UBR3-210	ENST00000484596	ADARB1	P78563	741 aa	Known RBP	4.61	□□□□□ -1.67
UBR3-210	ENST00000484596	IRF8	Q02556	426 aa		4.61	□□□□□ -1.67
UBR3-210	ENST00000484596	ECH1	Q13011	328 aa		4.61	□□□□□ -1.67
UBR3-210	ENST00000484596	DNAJC3	Q13217	504 aa		4.61	□□□□□ -1.67
UBR3-210	ENST00000484596	KRTAP13-3	Q3SY46	172 aa		4.61	□□□□□ -1.67
UBR3-210	ENST00000484596	VAX1	Q5SQQ9	334 aa		4.61	□□□□□ -1.67
UBR3-210	ENST00000484596	PDPK2P	Q6A1A2	396 aa		4.61	□□□□□ -1.67
UBR3-210	ENST00000484596	TMEM135	Q86UB9	458 aa		4.61	□□□□□ -1.67
UBR3-210	ENST00000484596	VN1R2	Q8NFZ6	395 aa		4.61	□□□□□ -1.67
UBR3-210	ENST00000484596	FANK1	Q8TC84	345 aa		4.61	□□□□□ -1.67
UBR3-210	ENST00000484596	FRAT1	Q92837	279 aa	Predicted RBP	4.61	□□□□□ -1.67
UBR3-210	ENST00000484596	ZNF707	Q96C28	371 aa	Predicted RBP	4.61	□□□□□ -1.67
UBR3-210	ENST00000484596	CYYR1	Q96J86	154 aa		4.61	□□□□□ -1.67
UBR3-210	ENST00000484596	ING4	Q9UNL4	249 aa		4.61	□□□□□ -1.67
UBR3-210	ENST00000484596	AK9	Q5TCS8	1911 aa		4.61	□□□□□ -1.67
UBR3-210	ENST00000484596	FOCAD	Q5VW36	1801 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	TRIOBP	Q9H2D6	2365 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	TRAV6	A0A075B6T7	132 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	HSBP1L1	C9JCN9	74 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	MRPS12	O15235	138 aa	Known RBP	4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	CLPX	O76031	633 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	ACTL6A	O96019	429 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	IGLV1-47	P01700	117 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	IGKV5-2	P06315	115 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	BTC	P35070	178 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	NUP62	P37198	522 aa	Predicted RBP	4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	WNT4	P56705	351 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	RAB11A	P62491	216 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	ACTA2	P62736	377 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	ACTG2	P63267	376 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	ACTC1	P68032	377 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	ACTA1	P68133	377 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	XIAP	P98170	497 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	ZNF92	Q03936	586 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	NSDHL	Q15738	373 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	RAB11B	Q15907	218 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	LIN9	Q5TKA1	542 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	TTC23L	Q6PF05	361 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	COMTD1	Q86VU5	262 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	ERO1B	Q86YB8	467 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	CMTM1	Q8IZ96	169 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	OR5B3	Q8NH48	314 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	ZNF502	Q8TBZ5	544 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	CAPSL	Q8WWF8	208 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	UCN3	Q969E3	161 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	RPUSD4	Q96CM3	377 aa	Known RBP	4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	ZBED3	Q96IU2	234 aa	Predicted RBP	4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	ARL5B	Q96KC2	179 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	FCRL1	Q96LA6	429 aa		4.6	□□□□□ -1.67
UBR3-210	ENST00000484596	IMMP1L	Q96LU5	166 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms