RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 FOXJ3Q9UPW0 622 aa12.36□□□□□ -0.43
CLK3-204ENST00000483723 CEP250Q9BV73 2442 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 OR6C65A6NJZ3 312 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 IFITM5A6NNB3 132 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 AIPO00170 330 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 MRPL33O75394 65 aaKnown RBP12.35□□□□□ -0.43
CLK3-204ENST00000483723 YES1P07947 543 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 ACSM4P0C7M7 580 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 IGFBP3P17936 291 aaPredicted RBP12.35□□□□□ -0.43
CLK3-204ENST00000483723 ELK1P19419 428 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 SPINK2P20155 84 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 OTX1P32242 354 aaPredicted RBP12.35□□□□□ -0.43
CLK3-204ENST00000483723 OXA1LQ15070 435 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 RSPO1Q2MKA7 263 aaPredicted RBP12.35□□□□□ -0.43
CLK3-204ENST00000483723 BCL2L15Q5TBC7 163 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 TSPO2Q5TGU0 170 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 STEAP3Q658P3 488 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 DCDC5Q6ZRR9 648 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 PRSS45Q7RTY3 260 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 TUSC5Q8IXB3 177 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 FBXO17Q96EF6 278 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 WACQ9BTA9 647 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 PRDM14Q9GZV8 571 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 SLC25A18Q9H1K4 315 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 SLCO5A1Q9H2Y9 848 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 EXO5Q9H790 373 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 GP6Q9HCN6 339 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 ABCB10Q9NRK6 738 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 PLSCR2Q9NRY7 297 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 SPATA2Q9UM82 520 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 GTF2A1LQ9UNN4 478 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 DHDHQ9UQ10 334 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 ZNF175Q9Y473 711 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 DNAJC13O75165 2243 aa12.35□□□□□ -0.43
CLK3-204ENST00000483723 A0A1B0GTI1 187 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 LOC107986453A0A1B0GWG9 222 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 TFECO14948 347 aaPredicted RBP12.34□□□□□ -0.43
CLK3-204ENST00000483723 PAHP00439 452 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 ZNF24P17028 368 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 FSTP19883 344 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 TAF13Q15543 124 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 C3AR1Q16581 482 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 CEACAM16Q2WEN9 425 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 ELFN2Q5R3F8 820 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 FAM131AQ6UXB0 335 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 CHMP1BQ7LBR1 199 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 ADGRE4PQ86SQ3 457 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 CENPSQ8N2Z9 138 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 OR5H6Q8NGV6 325 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 TRMT10AQ8TBZ6 339 aaKnown RBP12.34□□□□□ -0.43
CLK3-204ENST00000483723 TSEN15Q8WW01 171 aaKnown RBP12.34□□□□□ -0.43
CLK3-204ENST00000483723 FOXB1Q99853 325 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 MRI1Q9BV20 369 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 PRRG4Q9BZD6 226 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 MSRB2Q9Y3D2 182 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 AQP7O14520 342 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 CD2P06729 351 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 HSD11B1P28845 292 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 PRKXP51817 358 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 PLXDC2Q6UX71 529 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 Q6ZS92 163 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 ZNF627Q7L945 461 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 SIAH3Q8IW03 269 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 LRRC18Q8N456 261 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 MINDY2Q8NBR6 621 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 SLC7A10Q9NS82 523 aa12.34□□□□□ -0.43
CLK3-204ENST00000483723 CACNA1AO00555 2505 aa12.33□□□□□ -0.44
CLK3-204ENST00000483723 FREM2Q5SZK8 3169 aa12.33□□□□□ -0.44
CLK3-204ENST00000483723 P2RY10O00398 339 aa12.33□□□□□ -0.44
CLK3-204ENST00000483723 TGM6O95932 706 aa12.33□□□□□ -0.44
CLK3-204ENST00000483723 IGLV3-1P01715 115 aa12.33□□□□□ -0.44
CLK3-204ENST00000483723 APOA1P02647 267 aa12.33□□□□□ -0.44
CLK3-204ENST00000483723 EIF4EP06730 217 aaKnown RBP12.33□□□□□ -0.44
CLK3-204ENST00000483723 SNRPBP14678 240 aaKnown RBP12.33□□□□□ -0.44
CLK3-204ENST00000483723 CCL1P22362 96 aa12.33□□□□□ -0.44
CLK3-204ENST00000483723 CX3CR1P49238 355 aa12.33□□□□□ -0.44
CLK3-204ENST00000483723 ZNF121P58317 390 aaPredicted RBP12.33□□□□□ -0.44
CLK3-204ENST00000483723 ZNF169Q14929 603 aaPredicted RBP12.33□□□□□ -0.44
CLK3-204ENST00000483723 BAK1Q16611 211 aa12.33□□□□□ -0.44
CLK3-204ENST00000483723 KRTAP27-1Q3LI81 207 aa12.33□□□□□ -0.44
CLK3-204ENST00000483723 SLC22A24Q8N4F4 322 aa12.33□□□□□ -0.44
CLK3-204ENST00000483723 ZNF433Q8N7K0 673 aaPredicted RBP12.33□□□□□ -0.44
CLK3-204ENST00000483723 SAMD12Q8N8I0 201 aa12.33□□□□□ -0.44
CLK3-204ENST00000483723 ALKBH3Q96Q83 286 aaPredicted RBP12.33□□□□□ -0.44
CLK3-204ENST00000483723 CALHM2Q9HA72 323 aa12.33□□□□□ -0.44
CLK3-204ENST00000483723 ZNF275Q9NSD4 429 aaPredicted RBP12.33□□□□□ -0.44
CLK3-204ENST00000483723 ZNF319Q9P2F9 582 aa12.33□□□□□ -0.44
CLK3-204ENST00000483723 CAMK2AQ9UQM7 478 aa12.33□□□□□ -0.44
CLK3-204ENST00000483723 H3BSH0 61 aa12.32□□□□□ -0.44
CLK3-204ENST00000483723 WISP2O76076 250 aa12.32□□□□□ -0.44
CLK3-204ENST00000483723 CALCBP10092 127 aa12.32□□□□□ -0.44
CLK3-204ENST00000483723 SCAND1P57086 179 aa12.32□□□□□ -0.44
CLK3-204ENST00000483723 ECH1Q13011 328 aa12.32□□□□□ -0.44
CLK3-204ENST00000483723 RAB35Q15286 201 aa12.32□□□□□ -0.44
CLK3-204ENST00000483723 P2RY14Q15391 338 aa12.32□□□□□ -0.44
CLK3-204ENST00000483723 FAM166AQ6J272 317 aa12.32□□□□□ -0.44
CLK3-204ENST00000483723 Q6ZSR3 168 aa12.32□□□□□ -0.44
CLK3-204ENST00000483723 OR8B12Q8NGG6 310 aa12.32□□□□□ -0.44
CLK3-204ENST00000483723 COX4I2Q96KJ9 171 aa12.32□□□□□ -0.44
CLK3-204ENST00000483723 BRD7Q9NPI1 651 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms